Overview
- External ontology
- komodo.medium:585 (source link unavailable) — BCYE AGAR
- Applications
-
- Microbial cultivation
- pH range
- {'min': 6.4, 'max': 7.4}
- Notes
- pH buffer: KOH | Source: KOMODO ModelSEED | ID: 585 | DSMZ Medium: 585 (mediadive.medium:585) | Aerobic: No
Composition
flowchart LR
CultureMech_006055["bcye_agar"]
ing0_OXOID_Legionella_CYE_Agar_base["OXOID Legionella CYE-Agar base"]
CultureMech_006055 --> ing0_OXOID_Legionella_CYE_Agar_base
ing1_Yeast_extract["Yeast extract"]
CultureMech_006055 --> ing1_Yeast_extract
ing2_ACES["ACES"]
CultureMech_006055 --> ing2_ACES
CHEBI_39061["CHEBI:39061"]
ing2_ACES -.-> CHEBI_39061
ing3_Activated_charcoal["Activated charcoal"]
CultureMech_006055 --> ing3_Activated_charcoal
ing4_Agar["Agar"]
CultureMech_006055 --> ing4_Agar
CHEBI_2509["CHEBI:2509"]
ing4_Agar -.-> CHEBI_2509
ing5_L_Cysteine_HCl_x_H2O["L-Cysteine HCl x H2O"]
CultureMech_006055 --> ing5_L_Cysteine_HCl_x_H2O
CHEBI_91248["CHEBI:91248"]
ing5_L_Cysteine_HCl_x_H2O -.-> CHEBI_91248
ing6_Fe4_PO4_2["Fe4(PO4)2"]
CultureMech_006055 --> ing6_Fe4_PO4_2
CHEBI_132767["CHEBI:132767"]
ing6_Fe4_PO4_2 -.-> CHEBI_132767
ing7_KOH["KOH"]
CultureMech_006055 --> ing7_KOH
CHEBI_32035["CHEBI:32035"]
ing7_KOH -.-> CHEBI_32035
Ingredients (8)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 | OXOID Legionella CYE-Agar base | 1000 G_PER_L | ||
| 2 | Yeast extract | 20.4082 G_PER_L | ||
| 3 | ACES | 20.4082 G_PER_L |
CHEBI:39061
ACES
|
|
| 4 | Activated charcoal | 4.08163 G_PER_L | ||
| 5 | Agar | 30.6122 G_PER_L |
CHEBI:2509
agar
|
|
| 6 |
L-Cysteine HCl x H2O
C3H7NO2S.H2O.HCl 175.637 g/mol
|
40 G_PER_L |
CHEBI:91248
L-cysteine hydrochloride hydrate
|
|
| 7 |
Fe4(PO4)2
4Fe.3O7P2 745.203 g/mol
|
25 G_PER_L |
CHEBI:132767
ferric pyrophosphate
|
|
| 8 |
KOH
HO.K 56.105 g/mol
|
variable VARIABLE |
CHEBI:32035
potassium hydroxide
|
pH adjustment (extracted from notes) |
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:03.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 585 |
| 2026-02-03T11:19:04.741899 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 585 |
| 2026-03-13T03:09:04.304521Z | data-quality-cleanup-v1.0 | Data quality fixes | Added pH buffer: KOH |
| 2026-03-13T06:19:37.919607Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:006055 |
| 2026-03-14T00:00:00+00:00 | schema-defaulter-v1.0 | Applied schema defaults and normalizations | Added default concentration for ingredient: KOH |
| 2026-03-17T06:30:10.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:54.766492+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "BCYE AGAR" to "bcye_agar" for consistent matching |
| 2026-05-16T09:03:03.529030+00:00 | migrate_legacy_fields.py | MIGRATED_LEGACY_FIELDS | curation_history.date->timestamp=1 |
| 2026-05-20T06:00:52.725555+00:00 | migrate_ph_range.py | MIGRATED_PH_RANGE | ph_range '6.4-7.4' -> {'min': 6.4, 'max': 7.4} |
| 2026-06-05T07:40:24.701672+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 4 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:37:34.275013+00:00 | primary-term-regrounding-v1.0 | Re-grounded wrong primary term id (OAK-verified) | 1 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |