Overview
- External ontology
- komodo.medium:623 (source link unavailable) — THERMOCOCCUS LITORALIS medium
- Applications
-
- Microbial cultivation
- pH
- 6.5
- Notes
- Source: KOMODO ModelSEED | ID: 623 | DSMZ Medium: 623 (mediadive.medium:623) | Aerobic: Yes
Composition
flowchart LR
CultureMech_006129["thermococcus_litoralis_medium"]
ing0_Bacto_peptone["Bacto peptone"]
CultureMech_006129 --> ing0_Bacto_peptone
ing1_Yeast_extract["Yeast extract"]
CultureMech_006129 --> ing1_Yeast_extract
ing2_NaCl["NaCl"]
CultureMech_006129 --> ing2_NaCl
CHEBI_26710["CHEBI:26710"]
ing2_NaCl -.-> CHEBI_26710
ing3_MgCl2_x_6_H2O["MgCl2 x 6 H2O"]
CultureMech_006129 --> ing3_MgCl2_x_6_H2O
CHEBI_86345["CHEBI:86345"]
ing3_MgCl2_x_6_H2O -.-> CHEBI_86345
ing4_Na2SO4["Na2SO4"]
CultureMech_006129 --> ing4_Na2SO4
CHEBI_32149["CHEBI:32149"]
ing4_Na2SO4 -.-> CHEBI_32149
ing5_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
CultureMech_006129 --> ing5_CaCl2_x_2_H2O
CHEBI_86158["CHEBI:86158"]
ing5_CaCl2_x_2_H2O -.-> CHEBI_86158
ing6_KCl["KCl"]
CultureMech_006129 --> ing6_KCl
CHEBI_32588["CHEBI:32588"]
ing6_KCl -.-> CHEBI_32588
ing7_Na2CO3["Na2CO3"]
CultureMech_006129 --> ing7_Na2CO3
CHEBI_29377["CHEBI:29377"]
ing7_Na2CO3 -.-> CHEBI_29377
ing8_KBr["KBr"]
CultureMech_006129 --> ing8_KBr
CHEBI_32030["CHEBI:32030"]
ing8_KBr -.-> CHEBI_32030
ing9_SrCl2_x_6_H2O["SrCl2 x 6 H2O"]
CultureMech_006129 --> ing9_SrCl2_x_6_H2O
CHEBI_36385["CHEBI:36385"]
ing9_SrCl2_x_6_H2O -.-> CHEBI_36385
ing10_Boric_acid["Boric acid"]
CultureMech_006129 --> ing10_Boric_acid
CHEBI_33118["CHEBI:33118"]
ing10_Boric_acid -.-> CHEBI_33118
ing11_Na_meta_silicate["Na-meta silicate"]
CultureMech_006129 --> ing11_Na_meta_silicate
ing12_NaF["NaF"]
CultureMech_006129 --> ing12_NaF
CHEBI_28741["CHEBI:28741"]
ing12_NaF -.-> CHEBI_28741
ing13_KNO3["KNO3"]
CultureMech_006129 --> ing13_KNO3
CHEBI_63043["CHEBI:63043"]
ing13_KNO3 -.-> CHEBI_63043
ing14_Na2HPO4["Na2HPO4"]
CultureMech_006129 --> ing14_Na2HPO4
CHEBI_34683["CHEBI:34683"]
ing14_Na2HPO4 -.-> CHEBI_34683
ing15_Sulfur["Sulfur"]
CultureMech_006129 --> ing15_Sulfur
CHEBI_26833["CHEBI:26833"]
ing15_Sulfur -.-> CHEBI_26833
ing16_Resazurin["Resazurin"]
CultureMech_006129 --> ing16_Resazurin
CHEBI_8806["CHEBI:8806"]
ing16_Resazurin -.-> CHEBI_8806
Ingredients (17)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 | Bacto peptone | 5 G_PER_L | ||
| 2 | Yeast extract | 1 G_PER_L | ||
| 3 |
NaCl
Cl.Na 58.443 g/mol
|
19.45 G_PER_L |
CHEBI:26710
sodium chloride
|
|
| 4 |
MgCl2 x 6 H2O
2Cl.6H2O.Mg 203.301 g/mol
|
12.6 G_PER_L |
CHEBI:86345
magnesium dichloride hexahydrate
|
|
| 5 |
Na2SO4
2Na.O4S 142.043 g/mol
|
3.42 G_PER_L |
CHEBI:32149
sodium sulfate
|
|
| 6 |
CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
|
2.38 G_PER_L |
CHEBI:86158
calcium chloride dihydrate
|
|
| 7 |
KCl
Cl.K 74.551 g/mol
|
0.55 G_PER_L |
CHEBI:32588
potassium chloride
|
|
| 8 |
Na2CO3
CO3.2Na 105.988 g/mol
|
0.61 G_PER_L |
CHEBI:29377
sodium carbonate
|
|
| 9 |
KBr
Br.K 119.002 g/mol
|
0.08 G_PER_L |
CHEBI:32030
potassium bromide
|
|
| 10 |
SrCl2 x 6 H2O
Cl2Sr.6H2O 266.616 g/mol
|
0.057 G_PER_L |
CHEBI:36385
strontium dichloride hexahydrate
|
|
| 11 |
Boric acid
H3BO3 61.833 g/mol
|
0.022 G_PER_L |
CHEBI:33118
boric acid
|
|
| 12 | Na-meta silicate | 0.004 G_PER_L | ||
| 13 |
NaF
F.Na 41.988 g/mol
|
0.0024 G_PER_L |
CHEBI:28741
sodium fluoride
|
|
| 14 |
KNO3
K.NO3 101.102 g/mol
|
0.0016 G_PER_L |
CHEBI:63043
potassium nitrate
|
|
| 15 |
Na2HPO4
HO4P.2Na 141.958 g/mol
|
0.01 G_PER_L |
CHEBI:34683
disodium hydrogenphosphate
|
|
| 16 |
Sulfur
S 32.067 g/mol
|
10 G_PER_L |
CHEBI:26833
sulfur atom
|
|
| 17 |
Resazurin
C12H7NO4 229.191 g/mol
|
0.1 G_PER_L |
CHEBI:8806
Resazurin
|
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:03.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 623 |
| 2026-02-03T11:19:05.901280 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 623 |
| 2026-03-13T06:19:38.504668Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:006129 |
| 2026-03-17T06:30:14.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:55.438475+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "THERMOCOCCUS LITORALIS medium" to "thermococcus_litoralis_medium" for consistent matching |
| 2026-06-05T07:40:25.023397+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 13 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:37:34.291368+00:00 | primary-term-regrounding-v1.0 | Re-grounded wrong primary term id (OAK-verified) | 1 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-06-10T07:46:45.409009+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 5 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |