Overview
- External ontology
- komodo.medium:630_12048 (source link unavailable) — MEDIUM 630 MODIFIED FOR DSM 12048
- Applications
-
- Microbial cultivation
- pH
- 7.5
- Notes
- Source: KOMODO ModelSEED | ID: 630_12048 | DSMZ Medium: 630 (mediadive.medium:630) | Aerobic: No
Composition
flowchart LR
CultureMech_006140["medium_630_modified_for_dsm_12048"]
ing0_Yeast_extract["Yeast extract"]
CultureMech_006140 --> ing0_Yeast_extract
ing1_Tryptone["Tryptone"]
CultureMech_006140 --> ing1_Tryptone
ing2_Agar["Agar"]
CultureMech_006140 --> ing2_Agar
CHEBI_2509["CHEBI:2509"]
ing2_Agar -.-> CHEBI_2509
ing3_Nitrilotriacetic_acid["Nitrilotriacetic acid"]
CultureMech_006140 --> ing3_Nitrilotriacetic_acid
CHEBI_44557["CHEBI:44557"]
ing3_Nitrilotriacetic_acid -.-> CHEBI_44557
ing4_CaSO4_x_2_H2O["CaSO4 x 2 H2O"]
CultureMech_006140 --> ing4_CaSO4_x_2_H2O
CHEBI_32583["CHEBI:32583"]
ing4_CaSO4_x_2_H2O -.-> CHEBI_32583
ing5_MgCl2_x_6_H2O["MgCl2 x 6 H2O"]
CultureMech_006140 --> ing5_MgCl2_x_6_H2O
CHEBI_86345["CHEBI:86345"]
ing5_MgCl2_x_6_H2O -.-> CHEBI_86345
ing6_Fe_III__citrate["Fe(III) citrate"]
CultureMech_006140 --> ing6_Fe_III__citrate
CHEBI_144421["CHEBI:144421"]
ing6_Fe_III__citrate -.-> CHEBI_144421
ing7_KH2PO4["KH2PO4"]
CultureMech_006140 --> ing7_KH2PO4
CHEBI_63036["CHEBI:63036"]
ing7_KH2PO4 -.-> CHEBI_63036
ing8_Na2HPO4_x_12_H2O["Na2HPO4 x 12 H2O"]
CultureMech_006140 --> ing8_Na2HPO4_x_12_H2O
CHEBI_34683["CHEBI:34683"]
ing8_Na2HPO4_x_12_H2O -.-> CHEBI_34683
ing9_FeCl2_x_4_H2O["FeCl2 x 4 H2O"]
CultureMech_006140 --> ing9_FeCl2_x_4_H2O
CHEBI_86249["CHEBI:86249"]
ing9_FeCl2_x_4_H2O -.-> CHEBI_86249
ing10_MnCl2_x_4_H2O["MnCl2 x 4 H2O"]
CultureMech_006140 --> ing10_MnCl2_x_4_H2O
CHEBI_86368["CHEBI:86368"]
ing10_MnCl2_x_4_H2O -.-> CHEBI_86368
ing11_CoCl2_x_4_H2O["CoCl2 x 4 H2O"]
CultureMech_006140 --> ing11_CoCl2_x_4_H2O
CHEBI_35696["CHEBI:35696"]
ing11_CoCl2_x_4_H2O -.-> CHEBI_35696
ing12_CuCl2_x_2_H2O["CuCl2 x 2 H2O"]
CultureMech_006140 --> ing12_CuCl2_x_2_H2O
CHEBI_86318["CHEBI:86318"]
ing12_CuCl2_x_2_H2O -.-> CHEBI_86318
ing13_Na2MoO4_x_2_H2O["Na2MoO4 x 2 H2O"]
CultureMech_006140 --> ing13_Na2MoO4_x_2_H2O
CHEBI_75213["CHEBI:75213"]
ing13_Na2MoO4_x_2_H2O -.-> CHEBI_75213
ing14_H3BO3["H3BO3"]
CultureMech_006140 --> ing14_H3BO3
CHEBI_33118["CHEBI:33118"]
ing14_H3BO3 -.-> CHEBI_33118
ing15_NiCl2_x_6_H2O["NiCl2 x 6 H2O"]
CultureMech_006140 --> ing15_NiCl2_x_6_H2O
CHEBI_34887["CHEBI:34887"]
ing15_NiCl2_x_6_H2O -.-> CHEBI_34887
Ingredients (16)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 | Yeast extract | 2.5 G_PER_L | ||
| 2 | Tryptone | 2.5 G_PER_L | ||
| 3 | Agar | 28 G_PER_L |
CHEBI:2509
agar
|
|
| 4 |
Nitrilotriacetic acid
C6H9NO6 191.139 g/mol
|
12.9 G_PER_L |
CHEBI:44557
nitrilotriacetic acid
|
[Merged 2 duplicates: 0.1, 12.8] |
| 5 |
CaSO4 x 2 H2O
Ca.2H2O.O4S 172.171 g/mol
|
0.04 G_PER_L |
CHEBI:32583
calcium sulfate dihydrate
|
|
| 6 |
MgCl2 x 6 H2O
2Cl.6H2O.Mg 203.301 g/mol
|
0.2 G_PER_L |
CHEBI:86345
magnesium dichloride hexahydrate
|
|
| 7 |
Fe(III) citrate
C6H5FeO7 244.944 g/mol
|
0.00122472 G_PER_L |
CHEBI:144421
iron(III) citrate
|
|
| 8 |
KH2PO4
H2O4P.K 136.084 g/mol
|
5.44 G_PER_L |
CHEBI:63036
potassium dihydrogen phosphate
|
|
| 9 |
Na2HPO4 x 12 H2O
HO4P.2Na 141.958 g/mol
|
43 G_PER_L |
CHEBI:34683
disodium hydrogenphosphate
|
|
| 10 |
FeCl2 x 4 H2O
Cl2Fe.4H2O 198.811 g/mol
|
1 G_PER_L |
CHEBI:86249
iron dichloride tetrahydrate
|
|
| 11 |
MnCl2 x 4 H2O
Cl2Mn.4H2O 197.904 g/mol
|
0.5 G_PER_L |
CHEBI:86368
manganese(II) chloride tetrahydrate
|
|
| 12 |
CoCl2 x 4 H2O
2Cl.Co 129.839 g/mol
|
0.3 G_PER_L |
CHEBI:35696
cobalt dichloride
|
|
| 13 |
CuCl2 x 2 H2O
Cl2Cu.2H2O 170.482 g/mol
|
0.05 G_PER_L |
CHEBI:86318
copper(II) chloride dihydrate
|
|
| 14 |
Na2MoO4 x 2 H2O
2H2O.MoO4.2Na 241.946 g/mol
|
0.05 G_PER_L |
CHEBI:75213
sodium molybdate dihydrate
|
|
| 15 |
H3BO3
H3BO3 61.833 g/mol
|
0.02 G_PER_L |
CHEBI:33118
boric acid
|
|
| 16 |
NiCl2 x 6 H2O
Cl2Ni 129.599 g/mol
|
0.02 G_PER_L |
CHEBI:34887
nickel dichloride
|
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:03.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 630_12048 |
| 2026-02-03T11:19:05.469261 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 630 |
| 2026-03-13T03:09:06.254342Z | data-quality-cleanup-v1.0 | Data quality fixes | Merged 1 duplicate ingredient(s) |
| 2026-03-13T06:19:38.571177Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:006140 |
| 2026-03-17T06:30:12.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:55.514706+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "MEDIUM 630 MODIFIED FOR DSM 12048" to "medium_630_modified_for_dsm_12048" for consistent matching |
| 2026-06-05T07:41:26.078067+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 14 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:47:05.092948+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 2 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |