Overview
- External ontology
- komodo.medium:636 (source link unavailable) — ISP medium 2 WITH 5% NaCl
- Applications
-
- Microbial cultivation
- pH range
- {'min': 7.3, 'max': 7.5}
- Notes
- Source: KOMODO ModelSEED | ID: 636 | DSMZ Medium: 636 (mediadive.medium:636) | Aerobic: No
Composition
flowchart LR
CultureMech_006155["isp_medium_2_with_5_nacl"]
ing0_Yeast_extract["Yeast extract"]
CultureMech_006155 --> ing0_Yeast_extract
ing1_Malt_extract["Malt extract"]
CultureMech_006155 --> ing1_Malt_extract
ing2_Dextrose["Dextrose"]
CultureMech_006155 --> ing2_Dextrose
CHEBI_17634["CHEBI:17634"]
ing2_Dextrose -.-> CHEBI_17634
ing3_Agar["Agar"]
CultureMech_006155 --> ing3_Agar
CHEBI_2509["CHEBI:2509"]
ing3_Agar -.-> CHEBI_2509
ing4_NaCl["NaCl"]
CultureMech_006155 --> ing4_NaCl
CHEBI_26710["CHEBI:26710"]
ing4_NaCl -.-> CHEBI_26710
Ingredients (5)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 | Yeast extract | 4 G_PER_L | ||
| 2 | Malt extract | 10 G_PER_L | ||
| 3 |
Dextrose
C6H12O6 180.156 g/mol
|
4 G_PER_L |
CHEBI:17634
D-glucose
|
|
| 4 | Agar | 20 G_PER_L |
CHEBI:2509
agar
|
|
| 5 |
NaCl
Cl.Na 58.443 g/mol
|
50 G_PER_L |
CHEBI:26710
sodium chloride
|
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:03.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 636 |
| 2026-02-03T11:18:57.131474 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 636 |
| 2026-03-13T06:19:38.658720Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:006155 |
| 2026-03-17T06:29:47.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:55.618744+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "ISP medium 2 WITH 5% NaCl" to "isp_medium_2_with_5_nacl" for consistent matching |
| 2026-05-20T06:00:53.005882+00:00 | migrate_ph_range.py | MIGRATED_PH_RANGE | ph_range '7.3-7.5' -> {'min': 7.3, 'max': 7.5} |
| 2026-06-05T07:40:25.121492+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 3 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-10-08T03:14:00.696534+00:00 | codex | CURATED_KOMODO_CONCENTRATION_SOURCE_EVIDENCE | Exact medium/source membership, ingredient inventory/forms, physical-state conditions, literal snippets, and arithmetic checked. Stock boundaries, source-only rows, preparation context, and variants remain explicit follow-up tasks; secondary chemical mappings unchanged. KOMODO accession 636 is mapped to the same DSMZ accession by https://komodo.modelseed.org/servlet/KomodoTomcatServerSideUtilitiesModelSeed?MediaList; mapping response SHA256=d8259d98e6dbffdf6961a1ab92bc86f3567d5d96de352bfa079edb2a91e9580a. The mapping supports identity only, not ingredient quantities or variants. |