Overview
- External ontology
- komodo.medium:743 (source link unavailable) — HYDROGENOBACTER ACIDOPHILUS MEDIUM
- Applications
-
- Microbial cultivation
- pH
- 3.0
- Notes
- pH buffer: HCl | Source: KOMODO ModelSEED | ID: 743 | DSMZ Medium: 743 (mediadive.medium:743) | Aerobic: No
Composition
flowchart LR
CultureMech_006394["hydrogenobacter_acidophilus_medium"]
ing0_Sulfur["Sulfur"]
CultureMech_006394 --> ing0_Sulfur
CHEBI_26833["CHEBI:26833"]
ing0_Sulfur -.-> CHEBI_26833
ing1__NH4_2SO4["(NH4)2SO4"]
CultureMech_006394 --> ing1__NH4_2SO4
CHEBI_62946["CHEBI:62946"]
ing1__NH4_2SO4 -.-> CHEBI_62946
ing2_K2HPO4["K2HPO4"]
CultureMech_006394 --> ing2_K2HPO4
CHEBI_131527["CHEBI:131527"]
ing2_K2HPO4 -.-> CHEBI_131527
ing3_NaCl["NaCl"]
CultureMech_006394 --> ing3_NaCl
CHEBI_26710["CHEBI:26710"]
ing3_NaCl -.-> CHEBI_26710
ing4_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
CultureMech_006394 --> ing4_MgSO4_x_7_H2O
CHEBI_31795["CHEBI:31795"]
ing4_MgSO4_x_7_H2O -.-> CHEBI_31795
ing5_FeSO4_x_7_H2O["FeSO4 x 7 H2O"]
CultureMech_006394 --> ing5_FeSO4_x_7_H2O
CHEBI_75836["CHEBI:75836"]
ing5_FeSO4_x_7_H2O -.-> CHEBI_75836
ing6_CaCl2["CaCl2"]
CultureMech_006394 --> ing6_CaCl2
CHEBI_3312["CHEBI:3312"]
ing6_CaCl2 -.-> CHEBI_3312
ing7_MoO3["MoO3"]
CultureMech_006394 --> ing7_MoO3
CHEBI_30627["CHEBI:30627"]
ing7_MoO3 -.-> CHEBI_30627
ing8_ZnSO4_x_7_H2O["ZnSO4 x 7 H2O"]
CultureMech_006394 --> ing8_ZnSO4_x_7_H2O
CHEBI_32312["CHEBI:32312"]
ing8_ZnSO4_x_7_H2O -.-> CHEBI_32312
ing9_CuSO4_x_5_H2O["CuSO4 x 5 H2O"]
CultureMech_006394 --> ing9_CuSO4_x_5_H2O
CHEBI_31440["CHEBI:31440"]
ing9_CuSO4_x_5_H2O -.-> CHEBI_31440
ing10_H3BO3["H3BO3"]
CultureMech_006394 --> ing10_H3BO3
CHEBI_33118["CHEBI:33118"]
ing10_H3BO3 -.-> CHEBI_33118
ing11_MnSO4_x_5_H2O["MnSO4 x 5 H2O"]
CultureMech_006394 --> ing11_MnSO4_x_5_H2O
CHEBI_131524["CHEBI:131524"]
ing11_MnSO4_x_5_H2O -.-> CHEBI_131524
ing12_CoCl2_x_6_H2O["CoCl2 x 6 H2O"]
CultureMech_006394 --> ing12_CoCl2_x_6_H2O
CHEBI_53503["CHEBI:53503"]
ing12_CoCl2_x_6_H2O -.-> CHEBI_53503
ing13_HCl["HCl"]
CultureMech_006394 --> ing13_HCl
CHEBI_17883["CHEBI:17883"]
ing13_HCl -.-> CHEBI_17883
Ingredients (14)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Sulfur
S 32.067 g/mol
|
5 G_PER_L |
CHEBI:26833
sulfur atom
|
|
| 2 |
(NH4)2SO4
2H4N.O4S 132.141 g/mol
|
1 G_PER_L |
CHEBI:62946
ammonium sulfate
|
|
| 3 |
K2HPO4
HO4P.2K 174.174 g/mol
|
1 G_PER_L |
CHEBI:131527
dipotassium hydrogen phosphate
|
|
| 4 |
NaCl
Cl.Na 58.443 g/mol
|
1 G_PER_L |
CHEBI:26710
sodium chloride
|
|
| 5 |
MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
|
0.3 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
|
| 6 |
FeSO4 x 7 H2O
Fe.7H2O.O4S 278.013 g/mol
|
0.001 G_PER_L |
CHEBI:75836
iron(2+) sulfate heptahydrate
|
|
| 7 |
CaCl2
Ca.2Cl 110.984 g/mol
|
0.001 G_PER_L |
CHEBI:3312
calcium dichloride
|
|
| 8 |
MoO3
MoO3 143.937 g/mol
|
0.004 G_PER_L |
CHEBI:30627
molybdenum trioxide
|
|
| 9 |
ZnSO4 x 7 H2O
7H2O.O4S.Zn 287.558 g/mol
|
0.028 G_PER_L |
CHEBI:32312
zinc sulfate heptahydrate
|
|
| 10 |
CuSO4 x 5 H2O
Cu.5H2O.O4S 249.684 g/mol
|
0.002 G_PER_L |
CHEBI:31440
copper(II) sulfate pentahydrate
|
|
| 11 |
H3BO3
H3BO3 61.833 g/mol
|
0.004 G_PER_L |
CHEBI:33118
boric acid
|
|
| 12 |
MnSO4 x 5 H2O
5H2O.Mn.O4S 241.076 g/mol
|
0.004 G_PER_L |
CHEBI:131524
manganese(II) sulfate pentahydrate
|
|
| 13 |
CoCl2 x 6 H2O
2Cl.Co.6H2O 237.929 g/mol
|
0.004 G_PER_L |
CHEBI:53503
cobalt chloride hexahydrate
|
|
| 14 |
HCl
HCl 36.461 g/mol
|
variable VARIABLE |
CHEBI:17883
hydrogen chloride
|
pH adjustment (extracted from notes) |
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:03.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 743 |
| 2026-02-03T11:19:03.765612 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 743 |
| 2026-03-13T03:09:01.782011Z | data-quality-cleanup-v1.0 | Data quality fixes | Added pH buffer: HCl |
| 2026-03-13T06:19:40.410429Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:006394 |
| 2026-03-14T00:00:00+00:00 | schema-defaulter-v1.0 | Applied schema defaults and normalizations | Added default concentration for ingredient: HCl |
| 2026-03-17T06:30:07.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:57.706116+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "HYDROGENOBACTER ACIDOPHILUS MEDIUM" to "hydrogenobacter_acidophilus_medium" for consistent matching |
| 2026-05-16T09:03:04.296909+00:00 | migrate_legacy_fields.py | MIGRATED_LEGACY_FIELDS | curation_history.date->timestamp=1 |
| 2026-06-05T07:40:25.932897+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 14 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:46:45.721065+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 3 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |