Overview
- External ontology
- komodo.medium:772 (source link unavailable) — PARACOCCUS ALCALIPHILUS MEDIUM
- Applications
-
- Microbial cultivation
- pH
- 9.0
- Notes
- pH buffer: Na2CO3 | Source: KOMODO ModelSEED | ID: 772 | DSMZ Medium: 772 (mediadive.medium:772) | Aerobic: No
Composition
flowchart LR
CultureMech_006429["paracoccus_alcaliphilus_medium"]
ing0__NH4_2SO4["(NH4)2SO4"]
CultureMech_006429 --> ing0__NH4_2SO4
CHEBI_62946["CHEBI:62946"]
ing0__NH4_2SO4 -.-> CHEBI_62946
ing1_KH2PO4["KH2PO4"]
CultureMech_006429 --> ing1_KH2PO4
CHEBI_63036["CHEBI:63036"]
ing1_KH2PO4 -.-> CHEBI_63036
ing2_Na2HPO4["Na2HPO4"]
CultureMech_006429 --> ing2_Na2HPO4
CHEBI_34683["CHEBI:34683"]
ing2_Na2HPO4 -.-> CHEBI_34683
ing3_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
CultureMech_006429 --> ing3_MgSO4_x_7_H2O
CHEBI_31795["CHEBI:31795"]
ing3_MgSO4_x_7_H2O -.-> CHEBI_31795
ing4_Fe_III__citrate["Fe(III) citrate"]
CultureMech_006429 --> ing4_Fe_III__citrate
CHEBI_144421["CHEBI:144421"]
ing4_Fe_III__citrate -.-> CHEBI_144421
ing5_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
CultureMech_006429 --> ing5_CaCl2_x_2_H2O
CHEBI_86158["CHEBI:86158"]
ing5_CaCl2_x_2_H2O -.-> CHEBI_86158
ing6_MnCl2_x_4_H2O["MnCl2 x 4 H2O"]
CultureMech_006429 --> ing6_MnCl2_x_4_H2O
CHEBI_86368["CHEBI:86368"]
ing6_MnCl2_x_4_H2O -.-> CHEBI_86368
ing7_ZnSO4_x_7_H2O["ZnSO4 x 7 H2O"]
CultureMech_006429 --> ing7_ZnSO4_x_7_H2O
CHEBI_32312["CHEBI:32312"]
ing7_ZnSO4_x_7_H2O -.-> CHEBI_32312
ing8_CuSO4_x_2_H2O["CuSO4 x 2 H2O"]
CultureMech_006429 --> ing8_CuSO4_x_2_H2O
CHEBI_23414["CHEBI:23414"]
ing8_CuSO4_x_2_H2O -.-> CHEBI_23414
ing9_Thiamine_HCl_x_2_H2O["Thiamine-HCl x 2 H2O"]
CultureMech_006429 --> ing9_Thiamine_HCl_x_2_H2O
CHEBI_132751["CHEBI:132751"]
ing9_Thiamine_HCl_x_2_H2O -.-> CHEBI_132751
ing10_Methanol["Methanol"]
CultureMech_006429 --> ing10_Methanol
CHEBI_17790["CHEBI:17790"]
ing10_Methanol -.-> CHEBI_17790
ing11_Na2CO3["Na2CO3"]
CultureMech_006429 --> ing11_Na2CO3
CHEBI_29377["CHEBI:29377"]
ing11_Na2CO3 -.-> CHEBI_29377
Ingredients (12)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
(NH4)2SO4
2H4N.O4S 132.141 g/mol
|
3 G_PER_L |
CHEBI:62946
ammonium sulfate
|
|
| 2 |
KH2PO4
H2O4P.K 136.084 g/mol
|
1.4 G_PER_L |
CHEBI:63036
potassium dihydrogen phosphate
|
|
| 3 |
Na2HPO4
HO4P.2Na 141.958 g/mol
|
3 G_PER_L |
CHEBI:34683
disodium hydrogenphosphate
|
|
| 4 |
MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
|
0.2 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
|
| 5 |
Fe(III) citrate
C6H5FeO7 244.944 g/mol
|
0.03 G_PER_L |
CHEBI:144421
iron(III) citrate
|
|
| 6 |
CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
|
0.03 G_PER_L |
CHEBI:86158
calcium chloride dihydrate
|
|
| 7 |
MnCl2 x 4 H2O
Cl2Mn.4H2O 197.904 g/mol
|
0.005 G_PER_L |
CHEBI:86368
manganese(II) chloride tetrahydrate
|
|
| 8 |
ZnSO4 x 7 H2O
7H2O.O4S.Zn 287.558 g/mol
|
0.005 G_PER_L |
CHEBI:32312
zinc sulfate heptahydrate
|
|
| 9 |
CuSO4 x 2 H2O
Cu.O4S 159.609 g/mol
|
0.0005 G_PER_L |
CHEBI:23414
copper(II) sulfate
|
|
| 10 |
Thiamine-HCl x 2 H2O
C12H18N4OS.2Cl.2H2O 373.306 g/mol
|
0.0004 G_PER_L |
CHEBI:132751
thiamine hydrochloride dihydrate
|
|
| 11 |
Methanol
CH4O 32.042 g/mol
|
7.92 G_PER_L |
CHEBI:17790
methanol
|
|
| 12 |
Na2CO3
CO3.2Na 105.988 g/mol
|
variable VARIABLE |
CHEBI:29377
sodium carbonate
|
pH adjustment (extracted from notes) |
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:03.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 772 |
| 2026-02-03T11:19:02.978999 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 772 |
| 2026-03-13T03:08:59.651453Z | data-quality-cleanup-v1.0 | Data quality fixes | Added pH buffer: Na2CO3 |
| 2026-03-13T06:19:40.680527Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:006429 |
| 2026-03-14T00:00:00+00:00 | schema-defaulter-v1.0 | Applied schema defaults and normalizations | Added default concentration for ingredient: Na2CO3 |
| 2026-03-17T06:30:04.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:45:58.035490+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "PARACOCCUS ALCALIPHILUS MEDIUM" to "paracoccus_alcaliphilus_medium" for consistent matching |
| 2026-05-16T09:03:04.457105+00:00 | migrate_legacy_fields.py | MIGRATED_LEGACY_FIELDS | curation_history.date->timestamp=1 |
| 2026-06-05T07:40:26.251611+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 12 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:46:45.821129+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 4 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |