paracoccus_kocurii_medium

CultureMech:006430 bacterial DEFINED LIQUID
Original name: PARACOCCUS KOCURII MEDIUM

Overview

External ontology
komodo.medium:773 (source link unavailable) — PARACOCCUS KOCURII MEDIUM
Applications
  • Microbial cultivation
pH range
{'min': 6.8, 'max': 7.0}
Notes
Source: KOMODO ModelSEED | ID: 773 | DSMZ Medium: 773 (mediadive.medium:773) | Aerobic: No

Composition

flowchart LR
    CultureMech_006430["paracoccus_kocurii_medium"]
    ing0_NaH2PO4_x_2_H2O["NaH2PO4 x 2 H2O"]
    CultureMech_006430 --> ing0_NaH2PO4_x_2_H2O
    CHEBI_37585["CHEBI:37585"]
    ing0_NaH2PO4_x_2_H2O -.-> CHEBI_37585
    ing1_K2HPO4["K2HPO4"]
    CultureMech_006430 --> ing1_K2HPO4
    CHEBI_131527["CHEBI:131527"]
    ing1_K2HPO4 -.-> CHEBI_131527
    ing2__NH4_2SO4["(NH4)2SO4"]
    CultureMech_006430 --> ing2__NH4_2SO4
    CHEBI_62946["CHEBI:62946"]
    ing2__NH4_2SO4 -.-> CHEBI_62946
    ing3_Tetramethyl_ammonium_chloride["Tetramethyl ammonium chloride"]
    CultureMech_006430 --> ing3_Tetramethyl_ammonium_chloride
    ing4_Thiamine_HCl_x_2_H2O["Thiamine-HCl x 2 H2O"]
    CultureMech_006430 --> ing4_Thiamine_HCl_x_2_H2O
    CHEBI_132751["CHEBI:132751"]
    ing4_Thiamine_HCl_x_2_H2O -.-> CHEBI_132751
    ing5_Nitrilotriacetic_acid["Nitrilotriacetic acid"]
    CultureMech_006430 --> ing5_Nitrilotriacetic_acid
    CHEBI_44557["CHEBI:44557"]
    ing5_Nitrilotriacetic_acid -.-> CHEBI_44557
    ing6_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
    CultureMech_006430 --> ing6_MgSO4_x_7_H2O
    CHEBI_31795["CHEBI:31795"]
    ing6_MgSO4_x_7_H2O -.-> CHEBI_31795
    ing7_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
    CultureMech_006430 --> ing7_CaCl2_x_2_H2O
    CHEBI_86158["CHEBI:86158"]
    ing7_CaCl2_x_2_H2O -.-> CHEBI_86158
    ing8__NH4_6Mo7O24_x_4_H2O["(NH4)6Mo7O24 x 4 H2O"]
    CultureMech_006430 --> ing8__NH4_6Mo7O24_x_4_H2O
    CHEBI_91249["CHEBI:91249"]
    ing8__NH4_6Mo7O24_x_4_H2O -.-> CHEBI_91249
    ing9_FeSO4_x_7_H2O["FeSO4 x 7 H2O"]
    CultureMech_006430 --> ing9_FeSO4_x_7_H2O
    CHEBI_75836["CHEBI:75836"]
    ing9_FeSO4_x_7_H2O -.-> CHEBI_75836
    ing10_Na_EDTA["Na-EDTA"]
    CultureMech_006430 --> ing10_Na_EDTA
    CHEBI_64734["CHEBI:64734"]
    ing10_Na_EDTA -.-> CHEBI_64734
    ing11_ZnSO4_x_7_H2O["ZnSO4 x 7 H2O"]
    CultureMech_006430 --> ing11_ZnSO4_x_7_H2O
    CHEBI_32312["CHEBI:32312"]
    ing11_ZnSO4_x_7_H2O -.-> CHEBI_32312
    ing12_MnSO4_x_H2O["MnSO4 x H2O"]
    CultureMech_006430 --> ing12_MnSO4_x_H2O
    CHEBI_86364["CHEBI:86364"]
    ing12_MnSO4_x_H2O -.-> CHEBI_86364
    ing13_CuSO4_x_5_H2O["CuSO4 x 5 H2O"]
    CultureMech_006430 --> ing13_CuSO4_x_5_H2O
    CHEBI_31440["CHEBI:31440"]
    ing13_CuSO4_x_5_H2O -.-> CHEBI_31440
    ing14_Co_NO3_2_x_6_H2O["Co(NO3)2 x 6 H2O"]
    CultureMech_006430 --> ing14_Co_NO3_2_x_6_H2O
    CHEBI_86214["CHEBI:86214"]
    ing14_Co_NO3_2_x_6_H2O -.-> CHEBI_86214
    ing15_Na2B4O7_x_10_H2O["Na2B4O7 x 10 H2O"]
    CultureMech_006430 --> ing15_Na2B4O7_x_10_H2O
    CHEBI_131366["CHEBI:131366"]
    ing15_Na2B4O7_x_10_H2O -.-> CHEBI_131366

Ingredients (16)

# Ingredient Concentration Ontology Notes
1 NaH2PO4 x 2 H2O
H2O4P.Na 119.976 g/mol
1.71 G_PER_L CHEBI:37585
sodium dihydrogenphosphate
2 K2HPO4
HO4P.2K 174.174 g/mol
1.41 G_PER_L CHEBI:131527
dipotassium hydrogen phosphate
3 (NH4)2SO4
2H4N.O4S 132.141 g/mol
1 G_PER_L CHEBI:62946
ammonium sulfate
4 Tetramethyl ammonium chloride 1 G_PER_L
5 Thiamine-HCl x 2 H2O
C12H18N4OS.2Cl.2H2O 373.306 g/mol
0.0005 G_PER_L CHEBI:132751
thiamine hydrochloride dihydrate
6 Nitrilotriacetic acid
C6H9NO6 191.139 g/mol
10 G_PER_L CHEBI:44557
nitrilotriacetic acid
7 MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
29.7 G_PER_L CHEBI:31795
magnesium sulfate heptahydrate
8 CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
3.335 G_PER_L CHEBI:86158
calcium chloride dihydrate
9 (NH4)6Mo7O24 x 4 H2O
2H4N.MoO4 196.014 g/mol
0.00925 G_PER_L CHEBI:91249
ammonium molybdate
10 FeSO4 x 7 H2O
Fe.7H2O.O4S 278.013 g/mol
0.599 G_PER_L CHEBI:75836
iron(2+) sulfate heptahydrate
[Merged 2 duplicates: 0.099, 0.5]
11 Na-EDTA
C10H14N2O8.2Na 336.208 g/mol
0.25 G_PER_L CHEBI:64734
EDTA disodium salt (anhydrous)
12 ZnSO4 x 7 H2O
7H2O.O4S.Zn 287.558 g/mol
1.095 G_PER_L CHEBI:32312
zinc sulfate heptahydrate
13 MnSO4 x H2O
H2O.Mn.O4S 169.016 g/mol
0.154 G_PER_L CHEBI:86364
manganese(II) sulfate monohydrate
14 CuSO4 x 5 H2O
Cu.5H2O.O4S 249.684 g/mol
0.0392 G_PER_L CHEBI:31440
copper(II) sulfate pentahydrate
15 Co(NO3)2 x 6 H2O
Co.6H2O.2NO3 291.031 g/mol
0.0248 G_PER_L CHEBI:86214
cobalt dinitrate hexahydrate
16 Na2B4O7 x 10 H2O
10H2O.H4B4O9.2Na 417.401 g/mol
0.0177 G_PER_L CHEBI:131366
disodium tetraborate decahydrate

Target organisms

No target organisms are recorded.

Provenance

TimestampCuratorActionNotes
2026-01-27T01:15:03.fZ komodo-web-import Imported from KOMODO web table Source: KOMODO, ID: 773
2026-02-03T11:19:12.794367 dsmz-resolver-v1.0 Enriched with DSMZ composition Copied ingredients from DSMZ Medium 773
2026-03-13T03:09:26.673923Z data-quality-cleanup-v1.0 Data quality fixes Merged 1 duplicate ingredient(s)
2026-03-13T06:19:40.687932Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:006430
2026-03-17T06:30:35.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:45:58.044255+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "PARACOCCUS KOCURII MEDIUM" to "paracoccus_kocurii_medium" for consistent matching
2026-05-20T06:00:53.741796+00:00 migrate_ph_range.py MIGRATED_PH_RANGE ph_range '6.8-7.0' -> {'min': 6.8, 'max': 7.0}
2026-06-05T07:40:26.261480+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 13 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T07:46:45.824651+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 3 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.