salinibacter_ruber_medium (CultureMech:006858)

Overview

External ontology

komodo.medium:936 (source link unavailable) — SALINIBACTER RUBER medium

Applications

Microbial cultivation

pH

7.2

High-metal flag

True

Notes

Source: KOMODO ModelSEED | ID: 936 | DSMZ Medium: 936 (mediadive.medium:936) | Aerobic: No

Composition

flowchart LR
    CultureMech_006858["salinibacter_ruber_medium"]
    ing0_NaCl["NaCl"]
    CultureMech_006858 --> ing0_NaCl
    CHEBI_26710["CHEBI:26710"]
    ing0_NaCl -.-> CHEBI_26710
    ing1_MgCl2_x_6_H2O["MgCl2 x 6 H2O"]
    CultureMech_006858 --> ing1_MgCl2_x_6_H2O
    CHEBI_86345["CHEBI:86345"]
    ing1_MgCl2_x_6_H2O -.-> CHEBI_86345
    ing2_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
    CultureMech_006858 --> ing2_MgSO4_x_7_H2O
    CHEBI_31795["CHEBI:31795"]
    ing2_MgSO4_x_7_H2O -.-> CHEBI_31795
    ing3_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
    CultureMech_006858 --> ing3_CaCl2_x_2_H2O
    CHEBI_86158["CHEBI:86158"]
    ing3_CaCl2_x_2_H2O -.-> CHEBI_86158
    ing4_KCl["KCl"]
    CultureMech_006858 --> ing4_KCl
    CHEBI_32588["CHEBI:32588"]
    ing4_KCl -.-> CHEBI_32588
    ing5_NaHCO3["NaHCO3"]
    CultureMech_006858 --> ing5_NaHCO3
    CHEBI_32139["CHEBI:32139"]
    ing5_NaHCO3 -.-> CHEBI_32139
    ing6_NaBr["NaBr"]
    CultureMech_006858 --> ing6_NaBr
    CHEBI_63004["CHEBI:63004"]
    ing6_NaBr -.-> CHEBI_63004
    ing7_Yeast_extract["Yeast extract"]
    CultureMech_006858 --> ing7_Yeast_extract

Ingredients (8)

#	Ingredient	Concentration	Ontology
1	NaCl Cl.Na 58.443 g/mol	195 G_PER_L	CHEBI:26710 sodium chloride
2	MgCl2 x 6 H2O 2Cl.6H2O.Mg 203.301 g/mol	34.6 G_PER_L	CHEBI:86345 magnesium dichloride hexahydrate
3	MgSO4 x 7 H2O 7H2O.Mg.O4S 246.473 g/mol	49.5 G_PER_L	CHEBI:31795 magnesium sulfate heptahydrate
4	CaCl2 x 2 H2O Ca.2Cl.2H2O 147.014 g/mol	1.25 G_PER_L	CHEBI:86158 calcium chloride dihydrate
5	KCl Cl.K 74.551 g/mol	5 G_PER_L	CHEBI:32588 potassium chloride
6	NaHCO3 CHO3.Na 84.006 g/mol	0.25 G_PER_L	CHEBI:32139 sodium hydrogencarbonate
7	NaBr Br.Na 102.894 g/mol	0.625 G_PER_L	CHEBI:63004 sodium bromide
8	Yeast extract	1 G_PER_L

Target organisms

No target organisms are recorded.

Provenance

Timestamp	Curator	Action	Notes
2026-01-27T01:15:03.fZ	komodo-web-import	Imported from KOMODO web table	Source: KOMODO, ID: 936
2026-02-03T11:19:04.843046	dsmz-resolver-v1.0	Enriched with DSMZ composition	Copied ingredients from DSMZ Medium 936
2026-03-13T06:19:44.418598Z	culturemech-id-assigner-v1.0	Assigned CultureMech ID	Assigned stable identifier: CultureMech:006858
2026-03-17T06:30:10.000000Z	mediaingredientmech-enrichment-v1.0	Added MediaIngredientMech links	Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:46:02.337500+00:00	normalize_media_names_to_snake_case.py	NAME_NORMALIZED	Normalized name from "SALINIBACTER RUBER medium" to "salinibacter_ruber_medium" for consistent matching
2026-06-05T07:40:27.990688+00:00	mim-legacy-to-chebi-migration-v1.0	Refreshed legacy MediaIngredientMech links to CHEBI keying	Replaced 7 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T07:46:46.461762+00:00	primary-term-label-canonicalization-v1.0	Canonicalized primary term label to OBO canonical (OAK)	1 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.
2026-10-08T06:29:49.318246+00:00	codex	CURATED_KOMODO_CONCENTRATION_SOURCE_EVIDENCE	Exact medium/source membership, ingredient inventory/forms, physical-state conditions, literal snippets, and arithmetic checked. Stock boundaries, source-only rows, preparation context, and variants remain explicit follow-up tasks; secondary chemical mappings unchanged. KOMODO accession 936 is mapped to the same DSMZ accession by https://komodo.modelseed.org/servlet/KomodoTomcatServerSideUtilitiesModelSeed?MediaList; mapping response SHA256=d8259d98e6dbffdf6961a1ab92bc86f3567d5d96de352bfa079edb2a91e9580a. The mapping supports identity only, not ingredient quantities or variants.