methylotrophic_arthrobacter_and_hyphomicrobium_medium_replace_dimethysulfone_with_fructose

CultureMech:006862 bacterial DEFINED LIQUID
Original name: METHYLOTROPHIC ARTHROBACTER AND HYPHOMICROBIUM MEDIUM_replace_dimethysulfone_with_Fructose

Overview

External ontology
komodo.medium:939_replace_dimethysulfone_with_Fructose (source link unavailable) — METHYLOTROPHIC ARTHROBACTER AND HYPHOMICROBIUM MEDIUM_replace_dimethysulfone_with_Fructose
Applications
  • Microbial cultivation
pH range
{'min': 7.2, 'max': 7.5}
Notes
Source: KOMODO ModelSEED | ID: 939_replace_dimethysulfone_with_Fructose | DSMZ Medium: 939 (mediadive.medium:939) | Aerobic: No

Composition

flowchart LR
    CultureMech_006862["methylotrophic_arthrobacter_and_hyphomicrobium_medium_replace_dimet..."]
    ing0_Na2HPO4_x_2_H2O["Na2HPO4 x 2 H2O"]
    CultureMech_006862 --> ing0_Na2HPO4_x_2_H2O
    CHEBI_91258["CHEBI:91258"]
    ing0_Na2HPO4_x_2_H2O -.-> CHEBI_91258
    ing1_KH2PO4["KH2PO4"]
    CultureMech_006862 --> ing1_KH2PO4
    CHEBI_63036["CHEBI:63036"]
    ing1_KH2PO4 -.-> CHEBI_63036
    ing2_NH4Cl["NH4Cl"]
    CultureMech_006862 --> ing2_NH4Cl
    CHEBI_31206["CHEBI:31206"]
    ing2_NH4Cl -.-> CHEBI_31206
    ing3_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
    CultureMech_006862 --> ing3_MgSO4_x_7_H2O
    CHEBI_31795["CHEBI:31795"]
    ing3_MgSO4_x_7_H2O -.-> CHEBI_31795
    ing4_Methanol["Methanol"]
    CultureMech_006862 --> ing4_Methanol
    CHEBI_17790["CHEBI:17790"]
    ing4_Methanol -.-> CHEBI_17790
    ing5_EDTA["EDTA"]
    CultureMech_006862 --> ing5_EDTA
    CHEBI_4735["CHEBI:4735"]
    ing5_EDTA -.-> CHEBI_4735
    ing6_CaCl2_x_2_H2O["CaCl2 x 2 H2O"]
    CultureMech_006862 --> ing6_CaCl2_x_2_H2O
    CHEBI_86158["CHEBI:86158"]
    ing6_CaCl2_x_2_H2O -.-> CHEBI_86158
    ing7_CoCl2_x_6_H2O["CoCl2 x 6 H2O"]
    CultureMech_006862 --> ing7_CoCl2_x_6_H2O
    CHEBI_53503["CHEBI:53503"]
    ing7_CoCl2_x_6_H2O -.-> CHEBI_53503
    ing8__NH4_6Mo7O24["(NH4)6Mo7O24"]
    CultureMech_006862 --> ing8__NH4_6Mo7O24
    CHEBI_91249["CHEBI:91249"]
    ing8__NH4_6Mo7O24 -.-> CHEBI_91249
    ing9_CuSO4_x_5_H2O["CuSO4 x 5 H2O"]
    CultureMech_006862 --> ing9_CuSO4_x_5_H2O
    CHEBI_31440["CHEBI:31440"]
    ing9_CuSO4_x_5_H2O -.-> CHEBI_31440

Ingredients (10)

# Ingredient Concentration Ontology Notes
1 Na2HPO4 x 2 H2O
2H2O.HO4P.2Na 177.988 g/mol
7.9 G_PER_L CHEBI:91258
disodium hydrogenphosphate dihydrate
2 KH2PO4
H2O4P.K 136.084 g/mol
1.5 G_PER_L CHEBI:63036
potassium dihydrogen phosphate
3 NH4Cl
Cl.H4N 53.492 g/mol
0.8 G_PER_L CHEBI:31206
ammonium chloride
4 MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
0.1 G_PER_L CHEBI:31795
magnesium sulfate heptahydrate
5 Methanol
CH4O 32.042 g/mol
7.92 G_PER_L CHEBI:17790
methanol
6 EDTA
C10H16N2O8 292.244 g/mol
50 G_PER_L CHEBI:4735
ethylenediaminetetraacetic acid
7 CaCl2 x 2 H2O
Ca.2Cl.2H2O 147.014 g/mol
7.34 G_PER_L CHEBI:86158
calcium chloride dihydrate
8 CoCl2 x 6 H2O
2Cl.Co.6H2O 237.929 g/mol
0.5 G_PER_L CHEBI:53503
cobalt chloride hexahydrate
9 (NH4)6Mo7O24
2H4N.MoO4 196.014 g/mol
0.5 G_PER_L CHEBI:91249
ammonium molybdate
10 CuSO4 x 5 H2O
Cu.5H2O.O4S 249.684 g/mol
0.2 G_PER_L CHEBI:31440
copper(II) sulfate pentahydrate

Solutions

Trace elements solution

Dose: 10 ML_PER_L

Stock composition
IngredientConcentrationNotes
ZnSO4 x 7 H2O 1 G_PER_L
MnCl2 x 4 H2O 2.5 G_PER_L
FeSO4 x 7 H2O 5 G_PER_L

Target organisms

No target organisms are recorded.

Provenance

TimestampCuratorActionNotes
2026-01-27T01:15:03.fZ komodo-web-import Imported from KOMODO web table Source: KOMODO, ID: 939_replace_dimethysulfone_with_Fructose
2026-02-03T11:18:56.835378 dsmz-resolver-v1.0 Enriched with DSMZ composition Copied ingredients from DSMZ Medium 939
2026-03-13T06:19:44.436207Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:006862
2026-03-17T06:29:46.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:46:02.358030+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "METHYLOTROPHIC ARTHROBACTER AND HYPHOMICROBIUM MEDIUM_replace_dimethysulfone_with_Fructose" to "methylotrophic_arthrobacter_and_hyphomicrobium_medium_replace_dimethysulfone_with_fructose" for consistent matching
2026-05-20T06:01:57.041082+00:00 migrate_ph_range.py MIGRATED_PH_RANGE ph_range '7.2-7.5' -> {'min': 7.2, 'max': 7.5}
2026-06-05T07:41:33.504454+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 12 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T07:47:07.704990+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 3 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.
2026-08-07T20:44:33.887115+00:00 apply_cocktail_nesting.py NESTED_FLATTENED_COCKTAIL Moved 3 stock-strength component(s) out of ingredients into 1 solution(s): 3 -> 'Trace elements solution' @ 10 ml/l. Each moved component matched the MediaDive stock by name AND value; bulk ingredients sharing a name were left in place (#150).