Overview
- External ontology
- komodo.medium:970 (source link unavailable) — MARINOBACTER medium
- Applications
-
- Microbial cultivation
- pH
- 7.8
- Notes
- Source: KOMODO ModelSEED | ID: 970 | DSMZ Medium: 970 (mediadive.medium:970) | Aerobic: No
Composition
flowchart LR
CultureMech_006927["marinobacter_medium"]
ing0_NaCl["NaCl"]
CultureMech_006927 --> ing0_NaCl
CHEBI_26710["CHEBI:26710"]
ing0_NaCl -.-> CHEBI_26710
ing1_MgSO4["MgSO4"]
CultureMech_006927 --> ing1_MgSO4
CHEBI_32599["CHEBI:32599"]
ing1_MgSO4 -.-> CHEBI_32599
ing2_KCl["KCl"]
CultureMech_006927 --> ing2_KCl
CHEBI_32588["CHEBI:32588"]
ing2_KCl -.-> CHEBI_32588
ing3_Tris["Tris"]
CultureMech_006927 --> ing3_Tris
CHEBI_9754["CHEBI:9754"]
ing3_Tris -.-> CHEBI_9754
ing4_NH4Cl["NH4Cl"]
CultureMech_006927 --> ing4_NH4Cl
CHEBI_31206["CHEBI:31206"]
ing4_NH4Cl -.-> CHEBI_31206
ing5_CaCl2["CaCl2"]
CultureMech_006927 --> ing5_CaCl2
CHEBI_3312["CHEBI:3312"]
ing5_CaCl2 -.-> CHEBI_3312
ing6_Yeast_extract["Yeast extract"]
CultureMech_006927 --> ing6_Yeast_extract
ing7_Bacto_peptone["Bacto peptone"]
CultureMech_006927 --> ing7_Bacto_peptone
Ingredients (8)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
NaCl
Cl.Na 58.443 g/mol
|
11.7 G_PER_L |
CHEBI:26710
sodium chloride
|
|
| 2 |
MgSO4
Mg.O4S 120.368 g/mol
|
7.85 G_PER_L |
CHEBI:32599
magnesium sulfate
|
|
| 3 |
KCl
Cl.K 74.551 g/mol
|
0.74 G_PER_L |
CHEBI:32588
potassium chloride
|
|
| 4 |
Tris
C4H11NO3 121.136 g/mol
|
6 G_PER_L |
CHEBI:9754
tris
|
|
| 5 |
NH4Cl
Cl.H4N 53.492 g/mol
|
3 G_PER_L |
CHEBI:31206
ammonium chloride
|
|
| 6 |
CaCl2
Ca.2Cl 110.984 g/mol
|
1.47 G_PER_L |
CHEBI:3312
calcium dichloride
|
|
| 7 | Yeast extract | 5 G_PER_L | ||
| 8 | Bacto peptone | 5 G_PER_L |
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:03.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 970 |
| 2026-02-03T11:19:06.308969 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 970 |
| 2026-03-13T06:19:45.048675Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:006927 |
| 2026-03-17T06:30:15.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:03.063900+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "MARINOBACTER medium" to "marinobacter_medium" for consistent matching |
| 2026-06-05T07:40:28.270448+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 6 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:46:46.557053+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 2 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |
| 2026-10-08T06:29:49.318246+00:00 | codex | CURATED_KOMODO_CONCENTRATION_SOURCE_EVIDENCE | Exact medium/source membership, ingredient inventory/forms, physical-state conditions, literal snippets, and arithmetic checked. Stock boundaries, source-only rows, preparation context, and variants remain explicit follow-up tasks; secondary chemical mappings unchanged. KOMODO accession 970 is mapped to the same DSMZ accession by https://komodo.modelseed.org/servlet/KomodoTomcatServerSideUtilitiesModelSeed?MediaList; mapping response SHA256=d8259d98e6dbffdf6961a1ab92bc86f3567d5d96de352bfa079edb2a91e9580a. The mapping supports identity only, not ingredient quantities or variants. |