Overview
- External ontology
- komodo.medium:989 (source link unavailable) — ACETIC ACID BACTERIUM medium
- Applications
-
- Microbial cultivation
- pH range
- {'min': 6.6, 'max': 7.0}
- Notes
- Source: KOMODO ModelSEED | ID: 989 | DSMZ Medium: 989 (mediadive.medium:989) | Aerobic: No
Composition
flowchart LR
CultureMech_006960["acetic_acid_bacterium_medium"]
ing0_Bacto_peptone["Bacto peptone"]
CultureMech_006960 --> ing0_Bacto_peptone
ing1_Yeast_extract["Yeast extract"]
CultureMech_006960 --> ing1_Yeast_extract
ing2_Glucose["Glucose"]
CultureMech_006960 --> ing2_Glucose
CHEBI_17234["CHEBI:17234"]
ing2_Glucose -.-> CHEBI_17234
ing3_MgSO4_x_7_H2O["MgSO4 x 7 H2O"]
CultureMech_006960 --> ing3_MgSO4_x_7_H2O
CHEBI_31795["CHEBI:31795"]
ing3_MgSO4_x_7_H2O -.-> CHEBI_31795
ing4_Agar["Agar"]
CultureMech_006960 --> ing4_Agar
CHEBI_2509["CHEBI:2509"]
ing4_Agar -.-> CHEBI_2509
Ingredients (5)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 | Bacto peptone | 5 G_PER_L | ||
| 2 | Yeast extract | 5 G_PER_L | ||
| 3 |
Glucose
C6H12O6 180.156 g/mol
|
5 G_PER_L |
CHEBI:17234
glucose
|
|
| 4 |
MgSO4 x 7 H2O
7H2O.Mg.O4S 246.473 g/mol
|
1 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
|
| 5 | Agar | 15 G_PER_L |
CHEBI:2509
agar
|
(if required) |
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T01:15:03.fZ | komodo-web-import | Imported from KOMODO web table | Source: KOMODO, ID: 989 |
| 2026-02-03T11:18:59.424251 | dsmz-resolver-v1.0 | Enriched with DSMZ composition | Copied ingredients from DSMZ Medium 989 |
| 2026-03-13T06:19:45.280889Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:006960 |
| 2026-03-17T06:29:54.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:03.322623+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "ACETIC ACID BACTERIUM medium" to "acetic_acid_bacterium_medium" for consistent matching |
| 2026-05-20T06:00:55.301448+00:00 | migrate_ph_range.py | MIGRATED_PH_RANGE | ph_range '6.6-7.0' -> {'min': 6.6, 'max': 7.0} |
| 2026-06-05T07:40:28.402146+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 3 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-10-08T06:29:49.318246+00:00 | codex | CURATED_KOMODO_CONCENTRATION_SOURCE_EVIDENCE | Exact medium/source membership, ingredient inventory/forms, physical-state conditions, literal snippets, and arithmetic checked. Stock boundaries, source-only rows, preparation context, and variants remain explicit follow-up tasks; secondary chemical mappings unchanged. KOMODO accession 989 is mapped to the same DSMZ accession by https://komodo.modelseed.org/servlet/KomodoTomcatServerSideUtilitiesModelSeed?MediaList; mapping response SHA256=d8259d98e6dbffdf6961a1ab92bc86f3567d5d96de352bfa079edb2a91e9580a. The mapping supports identity only, not ingredient quantities or variants. |