1261

CultureMech:007467 bacterial COMPLEX LIQUID

Overview

External ontology
nbrc.medium:1257 (source link unavailable) — NBRC Medium 1257
pH range
{'min': 6.8, 'max': 7.0}
Notes
Source: NBRC Medium 1257 | Link: https://www.nite.go.jp/nbrc/catalogue/NBRCMediumDetailServlet?NO=1257 The NBRC Medium for Strain SR45 table lists pH 6.8 to 7.0, four nested stock solutions, and aseptic anaerobic addition of bicarbonate and sulfide solutions after sealed-vessel autoclaving.

Composition

flowchart LR
    CultureMech_007467["1261"]
    ing0_KH2PO4["KH2PO4"]
    CultureMech_007467 --> ing0_KH2PO4
    CHEBI_63036["CHEBI:63036"]
    ing0_KH2PO4 -.-> CHEBI_63036
    ing1_NH4Cl["NH4Cl"]
    CultureMech_007467 --> ing1_NH4Cl
    CHEBI_31206["CHEBI:31206"]
    ing1_NH4Cl -.-> CHEBI_31206
    ing2_NaCl["NaCl"]
    CultureMech_007467 --> ing2_NaCl
    CHEBI_26710["CHEBI:26710"]
    ing2_NaCl -.-> CHEBI_26710
    ing3_MgCl2_6H2O["MgCl2·6H2O"]
    CultureMech_007467 --> ing3_MgCl2_6H2O
    CHEBI_86345["CHEBI:86345"]
    ing3_MgCl2_6H2O -.-> CHEBI_86345
    ing4_KCl["KCl"]
    CultureMech_007467 --> ing4_KCl
    CHEBI_32588["CHEBI:32588"]
    ing4_KCl -.-> CHEBI_32588
    ing5_CaCl2_2H2O["CaCl2·2H2O"]
    CultureMech_007467 --> ing5_CaCl2_2H2O
    CHEBI_86158["CHEBI:86158"]
    ing5_CaCl2_2H2O -.-> CHEBI_86158
    ing6_Na2SO4["Na2SO4"]
    CultureMech_007467 --> ing6_Na2SO4
    CHEBI_32149["CHEBI:32149"]
    ing6_Na2SO4 -.-> CHEBI_32149
    ing7_Yeast_extract["Yeast extract"]
    CultureMech_007467 --> ing7_Yeast_extract
    ing8_Resazurin["Resazurin"]
    CultureMech_007467 --> ing8_Resazurin
    CHEBI_8806["CHEBI:8806"]
    ing8_Resazurin -.-> CHEBI_8806
    ing9_Sodium_acetate["Sodium acetate"]
    CultureMech_007467 --> ing9_Sodium_acetate
    CHEBI_32954["CHEBI:32954"]
    ing9_Sodium_acetate -.-> CHEBI_32954
    ing10_Trace_element_mixture_["Trace element mixture*"]
    CultureMech_007467 --> ing10_Trace_element_mixture_
    ing11_Selenite_tungstate_solution__["Selenite-tungstate solution**"]
    CultureMech_007467 --> ing11_Selenite_tungstate_solution__
    ing12_Bicarbonate_solution___["Bicarbonate solution***"]
    CultureMech_007467 --> ing12_Bicarbonate_solution___
    ing13_Sulfide_solution____["Sulfide solution****"]
    CultureMech_007467 --> ing13_Sulfide_solution____
    ing14_Distilled_water["Distilled water"]
    CultureMech_007467 --> ing14_Distilled_water
    CHEBI_15377["CHEBI:15377"]
    ing14_Distilled_water -.-> CHEBI_15377

Ingredients (15)

# Ingredient Concentration Ontology Notes
1 KH2PO4
H2O4P.K 136.084 g/mol
0.2 G_PER_L CHEBI:63036
potassium dihydrogen phosphate
2 NH4Cl
Cl.H4N 53.492 g/mol
0.25 G_PER_L CHEBI:31206
ammonium chloride
3 NaCl
Cl.Na 58.443 g/mol
1 G_PER_L CHEBI:26710
sodium chloride
4 MgCl2·6H2O
2Cl.6H2O.Mg 203.301 g/mol
0.4 G_PER_L CHEBI:86345
MgCl2 x 6 H2O
5 KCl
Cl.K 74.551 g/mol
0.5 G_PER_L CHEBI:32588
potassium chloride
6 CaCl2·2H2O
Ca.2Cl.2H2O 147.014 g/mol
0.15 G_PER_L CHEBI:86158
CaCl2 x 2 H2O
7 Na2SO4
2Na.O4S 142.043 g/mol
4 G_PER_L CHEBI:32149
sodium sulfate
8 Yeast extract 1 G_PER_L FOODON:03315426
Yeast extract
9 Resazurin
C12H7NO4 229.191 g/mol
1 MG_PER_L CHEBI:8806
Resazurin
10 Sodium acetate
C2H3O2.Na 82.034 g/mol
2.73 G_PER_L CHEBI:32954
sodium acetate
11 Trace element mixture* 1 ML_PER_L
12 Selenite-tungstate solution** 1 ML_PER_L
13 Bicarbonate solution*** 30 ML_PER_L
14 Sulfide solution**** 1.5 ML_PER_L
15 Distilled water
H2O 18.015 g/mol
970 ML_PER_L CHEBI:15377
water

Preparation

  1. Mix ingredients except for bicarbonate and sulfide solutions.
  2. Dispense the medium into culture vessels under a stream of nitrogen gas and seal with butyl rubber stoppers.
  3. Autoclave at 121 C for 15 minutes.
  4. Aseptically and anaerobically add the remaining ingredients using sterile syringes and enclose N2/CO2 (80/20) mixed gas with the vessels.
  5. Adjust pH to 6.8-7.0 using a compact pH meter.

Solutions

Trace element mixture

Stock composition
IngredientConcentrationNotes
HCl (25%; 7.7 M) 12.5 ML_PER_L
FeSO4·7H2O 2100 MG_PER_L
H3BO3 30 MG_PER_L
MnCl2·4H2O 100 MG_PER_L
CoCl2·6H2O 190 MG_PER_L
NiCl2·6H2O 24 MG_PER_L
CuCl2·2H2O 2 MG_PER_L
ZnSO4·7H2O 144 MG_PER_L
Na2MoO4·2H2O 36 MG_PER_L
Distilled water 987 ML_PER_L

Selenite-tungstate solution

Stock composition
IngredientConcentrationNotes
NaOH 0.4 G_PER_L
Na2SeO3·5H2O 6 MG_PER_L
Na2WO4·2H2O 8 MG_PER_L
Distilled water 1 L

Bicarbonate solution (1.0 M)

Stock composition
IngredientConcentrationNotes
NaHCO3 8.4 G_PER_L
Distilled water 100 ML_PER_L

Sulfide solution (1.0 M)

Stock composition
IngredientConcentrationNotes
Na2S·9H2O 12 G_PER_L
Distilled water 50 ML_PER_L

Target organisms

No target organisms are recorded.

Provenance

TimestampCuratorActionNotes
2026-02-20T00:22:36.043616Z nbrc-import Imported from NBRC Source: NBRC, Media No. 1257, URL: http://www.nbrc.nite.go.jp/NBRC2/NBRCMediumDetailServlet?NO=1257. Imported via ethical web scraping.
2026-03-09T08:04:19.615416+00:00 solution-migrator-v1.0 Migrated solutions from ingredients to solutions array Moved 1 solution(s) from ingredients
2026-03-13T03:08:47.461765Z data-quality-cleanup-v1.0 Data quality fixes Merged 92 duplicate ingredient(s)
2026-03-13T06:19:49.173592Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:007467
2026-03-14T00:00:00+00:00 schema-defaulter-v1.0 Applied schema defaults and normalizations Added default solution name
2026-05-16T09:03:06.618266+00:00 migrate_legacy_fields.py MIGRATED_LEGACY_FIELDS curation_history.date->timestamp=1
2026-08-19T21:54:22.698945+00:00 recover_nbrc_composition.py Recovered composition from source HTML Re-parsed the NBRC medium 1257 composition table from the preserved scrape; 15 ingredient(s) restored, 4 stock solution(s) nested rather than flattened, 1 unparsed solution blob(s) removed (#299).
2026-08-20T19:01:15.841315+00:00 apply_mim_groundings.py Adopted MIM published grounding Grounded 15 ingredient(s) from MIM's ingredient_mappings.sssom.tsv (2026-08-18), exactMatch only, where this record carried no CHEBI term (#308).
2026-09-07T00:00:00-07:00 repair_nbrc_partial_score25.py RESOLVED_NBRC_PARTIAL_SCORE25 Preserved the recovered NBRC Medium 1257 composition table.