1275

CultureMech:007468 bacterial COMPLEX LIQUID

Overview

External ontology
nbrc.medium:1274 (source link unavailable) — NBRC Medium 1274
pH
6.8
Notes
Source: NBRC Medium 1274 | Link: https://www.nite.go.jp/nbrc/catalogue/NBRCMediumDetailServlet?NO=1274 The NBRC Modified MJYS medium table lists final pH 6.8, two nested stock solutions, separate filtration of the vitamin solution, separate neutralization and autoclaving of Na2S, and tyndallization of sulfur before inoculation.

Composition

flowchart LR
    CultureMech_007468["1275"]
    ing0_NaCl["NaCl"]
    CultureMech_007468 --> ing0_NaCl
    CHEBI_26710["CHEBI:26710"]
    ing0_NaCl -.-> CHEBI_26710
    ing1_K2HPO4["K2HPO4"]
    CultureMech_007468 --> ing1_K2HPO4
    CHEBI_131527["CHEBI:131527"]
    ing1_K2HPO4 -.-> CHEBI_131527
    ing2_CaCl2_2H2O["CaCl2·2H2O"]
    CultureMech_007468 --> ing2_CaCl2_2H2O
    CHEBI_86158["CHEBI:86158"]
    ing2_CaCl2_2H2O -.-> CHEBI_86158
    ing3_NH4Cl["NH4Cl"]
    CultureMech_007468 --> ing3_NH4Cl
    CHEBI_31206["CHEBI:31206"]
    ing3_NH4Cl -.-> CHEBI_31206
    ing4_MgSO4_7H2O["MgSO4·7H2O"]
    CultureMech_007468 --> ing4_MgSO4_7H2O
    ing5_MgCl2_6H2O["MgCl2·6H2O"]
    CultureMech_007468 --> ing5_MgCl2_6H2O
    CHEBI_86345["CHEBI:86345"]
    ing5_MgCl2_6H2O -.-> CHEBI_86345
    ing6_KCl["KCl"]
    CultureMech_007468 --> ing6_KCl
    CHEBI_32588["CHEBI:32588"]
    ing6_KCl -.-> CHEBI_32588
    ing7_Fe_NH4_2_SO4_2_6H2O["Fe(NH4)2(SO4)2·6H2O"]
    CultureMech_007468 --> ing7_Fe_NH4_2_SO4_2_6H2O
    CHEBI_76181["CHEBI:76181"]
    ing7_Fe_NH4_2_SO4_2_6H2O -.-> CHEBI_76181
    ing8_Bacto_Yeast_Extract__Difco_["Bacto Yeast Extract (Difco)"]
    CultureMech_007468 --> ing8_Bacto_Yeast_Extract__Difco_
    ing9_Trace_elements_solution_["Trace elements solution*"]
    CultureMech_007468 --> ing9_Trace_elements_solution_
    ing10_Vitamin_solution__["Vitamin solution**"]
    CultureMech_007468 --> ing10_Vitamin_solution__
    ing11_NaHCO3["NaHCO3"]
    CultureMech_007468 --> ing11_NaHCO3
    CHEBI_32139["CHEBI:32139"]
    ing11_NaHCO3 -.-> CHEBI_32139
    ing12_Sulfur__powder_["Sulfur (powder)"]
    CultureMech_007468 --> ing12_Sulfur__powder_
    CHEBI_33403["CHEBI:33403"]
    ing12_Sulfur__powder_ -.-> CHEBI_33403
    ing13_Resazurin["Resazurin"]
    CultureMech_007468 --> ing13_Resazurin
    CHEBI_8806["CHEBI:8806"]
    ing13_Resazurin -.-> CHEBI_8806
    ing14_Na2S_9H2O["Na2S·9H2O"]
    CultureMech_007468 --> ing14_Na2S_9H2O
    CHEBI_76209["CHEBI:76209"]
    ing14_Na2S_9H2O -.-> CHEBI_76209
    ing15_Distilled_water["Distilled water"]
    CultureMech_007468 --> ing15_Distilled_water
    CHEBI_15377["CHEBI:15377"]
    ing15_Distilled_water -.-> CHEBI_15377

Ingredients (16)

# Ingredient Concentration Ontology Notes
1 NaCl
Cl.Na 58.443 g/mol
30 G_PER_L CHEBI:26710
sodium chloride
2 K2HPO4
HO4P.2K 174.174 g/mol
0.14 G_PER_L CHEBI:131527
dipotassium hydrogen phosphate
3 CaCl2·2H2O
Ca.2Cl.2H2O 147.014 g/mol
0.14 G_PER_L CHEBI:86158
CaCl2 x 2 H2O
4 NH4Cl
Cl.H4N 53.492 g/mol
0.25 G_PER_L CHEBI:31206
ammonium chloride
5 MgSO4·7H2O 3.4 G_PER_L
6 MgCl2·6H2O
2Cl.6H2O.Mg 203.301 g/mol
4.2 G_PER_L CHEBI:86345
MgCl2 x 6 H2O
7 KCl
Cl.K 74.551 g/mol
0.33 G_PER_L CHEBI:32588
potassium chloride
8 Fe(NH4)2(SO4)2·6H2O
Fe.6H2O.2H4N.2O4S 392.139 g/mol
0.01 G_PER_L CHEBI:76181
Fe(NH4)2(SO4)2 x 6 H2O
9 Bacto Yeast Extract (Difco) 1 G_PER_L FOODON:03315426
Yeast extract
10 Trace elements solution* 10 ML_PER_L
11 Vitamin solution** 2 ML_PER_L
12 NaHCO3
CHO3.Na 84.006 g/mol
2.5 G_PER_L CHEBI:32139
sodium hydrogencarbonate
13 Sulfur (powder) 3 G_PER_L CHEBI:33403
elemental sulfur
14 Resazurin
C12H7NO4 229.191 g/mol
1 MG_PER_L CHEBI:8806
Resazurin
15 Na2S·9H2O
9H2O.2Na.S 240.182 g/mol
0.5 G_PER_L CHEBI:76209
sodium sulfide nonahydrate
16 Distilled water
H2O 18.015 g/mol
1 L CHEBI:15377
water

Preparation

  1. Mix ingredients except for vitamin solution, sulfur, and Na2S·9H2O.
  2. Dispense the medium into culture vessels under a stream of N2/CO2 (80/20) and seal with butyl rubber stoppers.
  3. Autoclave at 121 C for 15 minutes.
  4. Separately neutralize and autoclave Na2S·9H2O as a 5% solution under N2.
  5. Filter-sterilize the vitamin solution.
  6. Sterilize sulfur by autoclaving for 60 minutes at 105 C on each of 3 successive days.
  7. Before inoculation, aseptically and anaerobically add vitamin solution, sulfur, and Na2S·9H2O.

Solutions

Trace elements solution

Stock composition
IngredientConcentrationNotes
Nitrilotriacetic acid (NTA) 12.8 G_PER_L
FeCl3·6H2O 1.35 G_PER_L
MnCl2·4H2O 0.1 G_PER_L
CoCl2·6H2O 0.024 G_PER_L
CaCl2·2H2O 0.1 G_PER_L
ZnCl2 0.1 G_PER_L
CuCl2·2H2O 0.025 G_PER_L
H3BO3 0.01 G_PER_L
Na2MoO4·2H2O 0.024 G_PER_L
NaCl 1 G_PER_L
NiCl2·6H2O 0.12 G_PER_L
Na2SeO4 0.8 MG_PER_L
Na2WO4 0.8 MG_PER_L
KAl(SO4)2·12H2O 4 MG_PER_L
Distilled water 1 L

Vitamin solution

Stock composition
IngredientConcentrationNotes
Biotin 2 MG_PER_L
Folic acid 2 MG_PER_L
Pyridoxine-HCl 10 MG_PER_L
Thiamine-HCl 5 MG_PER_L
Riboflavin 5 MG_PER_L
Nicotinic acid 5 MG_PER_L
Ca-pantothenate 5 MG_PER_L
p-Aminobenzoic acid 1 MG_PER_L
Vitamin B12 0.01 MG_PER_L
Distilled water 1 L

Target organisms

No target organisms are recorded.

Provenance

TimestampCuratorActionNotes
2026-02-20T00:22:36.048069Z nbrc-import Imported from NBRC Source: NBRC, Media No. 1274, URL: http://www.nbrc.nite.go.jp/NBRC2/NBRCMediumDetailServlet?NO=1274. Imported via ethical web scraping.
2026-03-09T08:05:08.121412+00:00 solution-migrator-v1.0 Migrated solutions from ingredients to solutions array Moved 1 solution(s) from ingredients
2026-03-13T03:09:39.854218Z data-quality-cleanup-v1.0 Data quality fixes Merged 92 duplicate ingredient(s)
2026-03-13T06:19:49.177288Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:007468
2026-03-14T00:00:00+00:00 schema-defaulter-v1.0 Applied schema defaults and normalizations Added default solution name
2026-05-16T09:03:06.621925+00:00 migrate_legacy_fields.py MIGRATED_LEGACY_FIELDS curation_history.date->timestamp=1
2026-08-19T21:54:22.712372+00:00 recover_nbrc_composition.py Recovered composition from source HTML Re-parsed the NBRC medium 1274 composition table from the preserved scrape; 16 ingredient(s) restored, 2 stock solution(s) nested rather than flattened, 1 unparsed solution blob(s) removed (#299).
2026-08-20T19:01:15.853895+00:00 apply_mim_groundings.py Adopted MIM published grounding Grounded 19 ingredient(s) from MIM's ingredient_mappings.sssom.tsv (2026-08-18), exactMatch only, where this record carried no CHEBI term (#308).
2026-08-26T02:12:32.890619+00:00 apply_mim_groundings.py Adopted MIM published grounding Grounded 1 ingredient(s) from MIM's ingredient_mappings.sssom.tsv (2026-08-18), exactMatch only, where this record carried no CHEBI term (#308).
2026-09-07T00:00:00-07:00 repair_nbrc_partial_score25.py RESOLVED_NBRC_PARTIAL_SCORE25 Preserved the recovered NBRC Medium 1274 composition table.