Overview
- External ontology
- nbrc.medium:256 (source link unavailable) — NBRC Medium 256
- pH range
- {'min': 9.0, 'max': 9.5}
- Notes
- Source: NBRC Medium 256 | Link: https://www.nite.go.jp/nbrc/catalogue/NBRCMediumDetailServlet?NO=256 The NBRC table instructs pH adjustment to 6.5 before autoclaving, separate Na2CO3 solution sterilization before adding it to the other autoclaved ingredients, and a final pH check of 9.0 to 9.5.
Composition
flowchart LR
CultureMech_007481["257"]
ing0_Yeast_extract["Yeast extract"]
CultureMech_007481 --> ing0_Yeast_extract
ing1_Bacto_Casamino_Acids__Difco_["Bacto Casamino Acids (Difco)"]
CultureMech_007481 --> ing1_Bacto_Casamino_Acids__Difco_
ing2_KH2PO4["KH2PO4"]
CultureMech_007481 --> ing2_KH2PO4
CHEBI_63036["CHEBI:63036"]
ing2_KH2PO4 -.-> CHEBI_63036
ing3_KCl["KCl"]
CultureMech_007481 --> ing3_KCl
CHEBI_32588["CHEBI:32588"]
ing3_KCl -.-> CHEBI_32588
ing4_NH4Cl["NH4Cl"]
CultureMech_007481 --> ing4_NH4Cl
CHEBI_31206["CHEBI:31206"]
ing4_NH4Cl -.-> CHEBI_31206
ing5_MgSO4_7H2O["MgSO4·7H2O"]
CultureMech_007481 --> ing5_MgSO4_7H2O
ing6_CaSO4_2H2O["CaSO4·2H2O"]
CultureMech_007481 --> ing6_CaSO4_2H2O
CHEBI_32583["CHEBI:32583"]
ing6_CaSO4_2H2O -.-> CHEBI_32583
ing7_Sodium_glutamate["Sodium glutamate"]
CultureMech_007481 --> ing7_Sodium_glutamate
CHEBI_64220["CHEBI:64220"]
ing7_Sodium_glutamate -.-> CHEBI_64220
ing8_Na2CO3["Na2CO3"]
CultureMech_007481 --> ing8_Na2CO3
CHEBI_29377["CHEBI:29377"]
ing8_Na2CO3 -.-> CHEBI_29377
ing9_NaCl["NaCl"]
CultureMech_007481 --> ing9_NaCl
CHEBI_26710["CHEBI:26710"]
ing9_NaCl -.-> CHEBI_26710
ing10_Distilled_water__make_up_to["Distilled water, make up to"]
CultureMech_007481 --> ing10_Distilled_water__make_up_to
ing11_Agar__if_needed__["Agar (if needed)*"]
CultureMech_007481 --> ing11_Agar__if_needed__
CHEBI_2509["CHEBI:2509"]
ing11_Agar__if_needed__ -.-> CHEBI_2509
Ingredients (12)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 | Yeast extract | 5 G_PER_L |
FOODON:03315426
Yeast extract
|
|
| 2 | Bacto Casamino Acids (Difco) | 5 G_PER_L | ||
| 3 |
KH2PO4
H2O4P.K 136.084 g/mol
|
1 G_PER_L |
CHEBI:63036
potassium dihydrogen phosphate
|
|
| 4 |
KCl
Cl.K 74.551 g/mol
|
1 G_PER_L |
CHEBI:32588
potassium chloride
|
|
| 5 |
NH4Cl
Cl.H4N 53.492 g/mol
|
1 G_PER_L |
CHEBI:31206
ammonium chloride
|
|
| 6 | MgSO4·7H2O | 0.24 G_PER_L | ||
| 7 |
CaSO4·2H2O
Ca.2H2O.O4S 172.171 g/mol
|
0.17 G_PER_L |
CHEBI:32583
CaSO4 x 2 H2O
|
|
| 8 |
Sodium glutamate
C5H8NO4.Na 169.112 g/mol
|
1 G_PER_L |
CHEBI:64220
Na glutamate
|
|
| 9 |
Na2CO3
CO3.2Na 105.988 g/mol
|
5 G_PER_L |
CHEBI:29377
sodium carbonate
|
|
| 10 |
NaCl
Cl.Na 58.443 g/mol
|
250 G_PER_L |
CHEBI:26710
sodium chloride
|
|
| 11 | Distilled water, make up to | 1 L | ||
| 12 | Agar (if needed)* | 20 G_PER_L |
CHEBI:2509
Agar
|
Preparation
- Dissolve agar by heating before adding NaCl.
- Adjust pH to 6.5 before autoclaving.
- Autoclave the non-Na2CO3 ingredients.
- Add separately sterilized Na2CO3 solution to the other autoclaved ingredients.
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-02-20T00:22:35.943092Z | nbrc-import | Imported from NBRC | Source: NBRC, Media No. 256, URL: http://www.nbrc.nite.go.jp/NBRC2/NBRCMediumDetailServlet?NO=256. Imported via ethical web scraping. |
| 2026-03-09T08:04:35.433793+00:00 | solution-migrator-v1.0 | Migrated solutions from ingredients to solutions array | Moved 1 solution(s) from ingredients |
| 2026-03-13T03:09:04.784469Z | data-quality-cleanup-v1.0 | Data quality fixes | Merged 28 duplicate ingredient(s) |
| 2026-03-13T06:19:49.215244Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:007481 |
| 2026-03-14T00:00:00+00:00 | schema-defaulter-v1.0 | Applied schema defaults and normalizations | Added default solution name |
| 2026-05-16T09:03:06.668394+00:00 | migrate_legacy_fields.py | MIGRATED_LEGACY_FIELDS | curation_history.date->timestamp=1 |
| 2026-08-19T21:54:22.839834+00:00 | recover_nbrc_composition.py | Recovered composition from source HTML | Re-parsed the NBRC medium 256 composition table from the preserved scrape; 12 ingredient(s) restored, 0 stock solution(s) nested rather than flattened, 1 unparsed solution blob(s) removed (#299). |
| 2026-08-20T19:01:15.953066+00:00 | apply_mim_groundings.py | Adopted MIM published grounding | Grounded 5 ingredient(s) from MIM's ingredient_mappings.sssom.tsv (2026-08-18), exactMatch only, where this record carried no CHEBI term (#308). |
| 2026-09-07T00:00:00-07:00 | repair_nbrc_partial_score25.py | RESOLVED_NBRC_PARTIAL_SCORE25 | Preserved the recovered NBRC Medium 256 composition table. |