Overview
- External ontology
- TOGO:M1052 — Marinitoga Medium
- Applications
-
- Microbial cultivation
- Notes
- Source: https://togomedium.org/medium/M1052 Original source: JCM - JCM_M997 Original URL: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=997
Composition
flowchart LR
CultureMech_007568["marinitoga_medium"]
ing0_Distilled_water["Distilled water"]
CultureMech_007568 --> ing0_Distilled_water
CHEBI_15377["CHEBI:15377"]
ing0_Distilled_water -.-> CHEBI_15377
ing1_Resazurin["Resazurin"]
CultureMech_007568 --> ing1_Resazurin
CHEBI_8806["CHEBI:8806"]
ing1_Resazurin -.-> CHEBI_8806
ing2_Na2S_9H2O["Na2S・9H2O"]
CultureMech_007568 --> ing2_Na2S_9H2O
CHEBI_76209["CHEBI:76209"]
ing2_Na2S_9H2O -.-> CHEBI_76209
ing3_Sea_Salts__Sigma_["Sea Salts (Sigma)"]
CultureMech_007568 --> ing3_Sea_Salts__Sigma_
ing4_PIPES__Sigma_["PIPES (Sigma)"]
CultureMech_007568 --> ing4_PIPES__Sigma_
ing5_Glucose["Glucose"]
CultureMech_007568 --> ing5_Glucose
CHEBI_17234["CHEBI:17234"]
ing5_Glucose -.-> CHEBI_17234
ing6_Yeast_extract__BD_Difco_["Yeast extract (BD-Difco)"]
CultureMech_007568 --> ing6_Yeast_extract__BD_Difco_
ing7_Tryptone__BD_Difco_["Tryptone (BD-Difco)"]
CultureMech_007568 --> ing7_Tryptone__BD_Difco_
ing8_L__Cysteine_HCl_H2O["L--Cysteine・HCl・H2O"]
CultureMech_007568 --> ing8_L__Cysteine_HCl_H2O
CHEBI_91248["CHEBI:91248"]
ing8_L__Cysteine_HCl_H2O -.-> CHEBI_91248
ing9_N2["N2"]
CultureMech_007568 --> ing9_N2
CHEBI_17997["CHEBI:17997"]
ing9_N2 -.-> CHEBI_17997
Ingredients (10)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Distilled water
H2O 18.015 g/mol
|
1 G_PER_L |
CHEBI:15377
water
|
Role: Solvating media; Properties: Inorganic compound, Simple component, Defined component |
| 2 |
Resazurin
C12H7NO4 229.191 g/mol
|
0.5 G_PER_L |
CHEBI:8806
Resazurin
|
Role: pH dependent redox indicator; Properties: Defined component, Simple component, Organic compound |
| 3 |
Na2S・9H2O
9H2O.2Na.S 240.182 g/mol
|
0.5 G_PER_L |
CHEBI:76209
sodium sulfide nonahydrate
|
Role: Reducing agent; Properties: Simple component, Inorganic compound, Defined component |
| 4 | Sea Salts (Sigma) | 30 G_PER_L | Role: Mineral source; Properties: Defined component, Complex component | |
| 5 | PIPES (Sigma) | 6 G_PER_L | Role: Buffer; Properties: Simple component, Organic compound, Defined component | |
| 6 |
Glucose
C6H12O6 180.156 g/mol
|
2.5 G_PER_L |
CHEBI:17234
glucose
|
Role: Carbon source; Properties: Organic compound, Simple component, Defined component |
| 7 | Yeast extract (BD-Difco) | 1 G_PER_L | Properties: Undefined component | |
| 8 | Tryptone (BD-Difco) | 1 G_PER_L | Properties: Undefined component | |
| 9 |
L--Cysteine・HCl・H2O
C3H7NO2S.H2O.HCl 175.637 g/mol
|
0.5 G_PER_L |
CHEBI:91248
L-cysteine hydrochloride hydrate
|
Properties: Defined component, Simple component, Organic compound |
| 10 |
N2
N2 28.014 g/mol
|
variable VARIABLE |
CHEBI:17997
dinitrogen
|
Properties: Gas |
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T06:35:53.831028Z | togo-import | Imported from TOGO Medium | Source: JCM, ID: M1052 |
| 2026-01-28T19:48:19.446394Z | chebi-enrichment | Added CHEBI ontology terms to ingredients | Enriched using MicrobeMediaParam and MediaDive chemical mappings |
| 2026-02-03T00:00:00+00:00 | schema-defaulter-v1.0 | Applied schema defaults and normalizations | Added default concentration for ingredient: N2 |
| 2026-03-13T06:19:49.734957Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:007568 |
| 2026-03-17T06:30:06.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:08.085783+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "Marinitoga Medium" to "marinitoga_medium" for consistent matching |
| 2026-05-16T09:03:07.205936+00:00 | migrate_legacy_fields.py | MIGRATED_LEGACY_FIELDS | curation_history.date->timestamp=1 |
| 2026-06-05T07:40:30.033981+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 3 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |