acidithrix_ferrooydans_medium

CultureMech:007588 bacterial COMPLEX LIQUID
Original name: Acidithrix Ferrooydans Medium

Overview

External ontology
TOGO:M1070 — Acidithrix Ferrooydans Medium
Applications
  • Microbial cultivation
pH
2.5
Notes
TOGO M1070 records JCM Medium 1012 with 100 ml/L UBS solution from M752/JCM 729, 10 ml/L Trace minerals from M142/JCM 151, 10 ml/L Ni-Se-W solution from M236/JCM 244, glucose, yeast extract, and distilled water. JCM 1012 adjusts the base to pH 2.5 with H2SO4, autoclaves it, then adds filter-sterilized 1 M FeSO4 solution at pH 2.0 after cooling.

Composition

flowchart LR
    CultureMech_007588["acidithrix_ferrooydans_medium"]
    ing0_Distilled_water["Distilled water"]
    CultureMech_007588 --> ing0_Distilled_water
    CHEBI_15377["CHEBI:15377"]
    ing0_Distilled_water -.-> CHEBI_15377
    ing1_Yeast_extract["Yeast extract"]
    CultureMech_007588 --> ing1_Yeast_extract
    ing2_Glucose["Glucose"]
    CultureMech_007588 --> ing2_Glucose
    CHEBI_17234["CHEBI:17234"]
    ing2_Glucose -.-> CHEBI_17234
    ing3_H2SO4["H2SO4"]
    CultureMech_007588 --> ing3_H2SO4
    CHEBI_26836["CHEBI:26836"]
    ing3_H2SO4 -.-> CHEBI_26836

Ingredients (4)

# Ingredient Concentration Ontology Notes
1 Distilled water
H2O 18.015 g/mol
1.0 L CHEBI:15377
water
TOGO M1070 / JCM Medium 1012 lists 1.0 L Distilled water.
2 Yeast extract 0.2 G_PER_L TOGO M1070 / JCM Medium 1012 lists 0.2 g/L Yeast extract.
3 Glucose
C6H12O6 180.156 g/mol
0.9 G_PER_L CHEBI:17234
glucose
TOGO M1070 / JCM Medium 1012 lists 0.9 g/L Glucose.
4 H2SO4
H2O4S 98.079 g/mol
variable VARIABLE CHEBI:26836
sulfuric acid
TOGO M1070 / JCM Medium 1012 adjusts the medium to pH 2.5 with H2SO4.

Preparation

  1. Mix UBS solution, Trace minerals, Ni-Se-W solution, glucose, yeast extract, and distilled water thoroughly.
  2. Adjust the medium to pH 2.5 with H2SO4.
  3. Autoclave the acidified base medium.
  4. Filter-sterilize 1 M FeSO4 solution at pH 2.0.
  5. After cooling, add 5.0 ml/L filter-sterilized 1 M FeSO4 solution at pH 2.0.

Solutions

UBS solution

Dose: 100.0 ML_PER_L

Stock composition
IngredientConcentrationNotes
Na2SO4 14.0 G_PER_L TOGO M752 / JCM Medium 729 lists 14.0 g/L Na2SO4.
(NH4)2SO4 30.0 G_PER_L TOGO M752 / JCM Medium 729 lists 30.0 g/L (NH4)2SO4.
KCl 1.0 G_PER_L TOGO M752 / JCM Medium 729 lists 1.0 g/L KCl.
MgSO4 x 7H2O 5.0 G_PER_L TOGO M752 / JCM Medium 729 lists 5.0 g/L MgSO4 x 7H2O.
K2HPO4 0.5 G_PER_L TOGO M752 / JCM Medium 729 lists 0.5 g/L K2HPO4.
Ca(NO3)2 x 4H2O 0.14 G_PER_L TOGO M752 / JCM Medium 729 lists 0.14 g/L Ca(NO3)2 x 4H2O.
Distilled water 1.0 L TOGO M752 / JCM Medium 729 lists 1.0 L Distilled water.
TOGO M1070 / JCM Medium 1012 adds 100.0 ml/L UBS solution from M752/JCM 729.

Trace minerals

Dose: 10.0 ML_PER_L

Stock composition
IngredientConcentrationNotes
Nitrilotriacetic acid 1.5 G_PER_L TOGO M142 / JCM Medium 151 lists 1.5 g/L Nitrilotriacetic acid.
MgSO4 x 7H2O 3.0 G_PER_L TOGO M142 / JCM Medium 151 lists 3.0 g/L MgSO4 x 7H2O.
MnSO4 x n H2O 0.5 G_PER_L TOGO M142 / JCM Medium 151 lists 0.5 g/L MnSO4 x n H2O.
NaCl 1.0 G_PER_L TOGO M142 / JCM Medium 151 lists 1.0 g/L NaCl.
FeSO4 x 7H2O 0.1 G_PER_L TOGO M142 / JCM Medium 151 lists 0.1 g/L FeSO4 x 7H2O.
CoSO4 x 7H2O 0.1 G_PER_L TOGO M142 / JCM Medium 151 lists 0.1 g/L CoSO4 x 7H2O.
CaCl2 x 2H2O 0.1 G_PER_L TOGO M142 / JCM Medium 151 lists 0.1 g/L CaCl2 x 2H2O.
ZnSO4 x 7H2O 0.1 G_PER_L TOGO M142 / JCM Medium 151 lists 0.1 g/L ZnSO4 x 7H2O.
CuSO4 x 5H2O 0.01 G_PER_L TOGO M142 / JCM Medium 151 lists 0.01 g/L CuSO4 x 5H2O.
AlK(SO4)2 0.01 G_PER_L TOGO M142 / JCM Medium 151 lists 0.01 g/L AlK(SO4)2.
H3BO3 0.01 G_PER_L TOGO M142 / JCM Medium 151 lists 0.01 g/L H3BO3.
Na2MoO4 x 2H2O 0.01 G_PER_L TOGO M142 / JCM Medium 151 lists 0.01 g/L Na2MoO4 x 2H2O.
Distilled water 1.0 L TOGO M142 / JCM Medium 151 lists 1.0 L Distilled water.
KOH solution variable VARIABLE TOGO M142 / JCM Medium 151 adjusts nitrilotriacetic acid to pH 6.5 with KOH solution before adding minerals.
TOGO M1070 / JCM Medium 1012 adds 10.0 ml/L Trace minerals from M142/JCM 151.

Ni-Se-W solution

Dose: 10.0 ML_PER_L

Stock composition
IngredientConcentrationNotes
NiCl2 x 6H2O 25.0 MG_PER_L TOGO M236 / JCM Medium 244 lists 25.0 mg/L NiCl2 x 6H2O.
(NH4)2Ni(SO4)2 x 6H2O 2.0 G_PER_L TOGO M236 / JCM Medium 244 lists 2.0 g/L (NH4)2Ni(SO4)2 x 6H2O.
Na2SeO3 0.3 MG_PER_L TOGO M236 / JCM Medium 244 lists 0.3 mg/L Na2SeO3.
Na2SeO4 10.0 MG_PER_L TOGO M236 / JCM Medium 244 lists 10.0 mg/L Na2SeO4.
Na2WO4 x 2H2O 10.0 MG_PER_L TOGO M236 / JCM Medium 244 lists 10.0 mg/L Na2WO4 x 2H2O.
Distilled water 1.0 L TOGO M236 / JCM Medium 244 lists 1.0 L Distilled water.
TOGO M1070 / JCM Medium 1012 adds 10.0 ml/L Ni-Se-W solution from M236/JCM 244.

1 M FeSO4 solution (pH 2.0)

Dose: 5.0 ML_PER_L

Stock composition
IngredientConcentrationNotes
FeSO4 variable VARIABLE TOGO M1070 / JCM Medium 1012 lists a 1 M FeSO4 solution at pH 2.0; the molar stock concentration is preserved in this note.
TOGO M1070 / JCM Medium 1012 adds 5.0 ml/L filter-sterilized 1 M FeSO4 solution at pH 2.0 after cooling.

Target organisms

No target organisms are recorded.

Provenance

TimestampCuratorActionNotes
2026-01-27T06:35:53.866811Z togo-import Imported from TOGO Medium Source: JCM, ID: M1070
2026-01-28T19:48:36.267079Z chebi-enrichment Added CHEBI ontology terms to ingredients Enriched using MicrobeMediaParam and MediaDive chemical mappings
2026-02-03T00:00:00+00:00 schema-defaulter-v1.0 Applied schema defaults and normalizations Added default concentration for ingredient: H2SO4
2026-03-09T08:05:00.467968+00:00 solution-migrator-v1.0 Migrated solutions from ingredients to solutions array Moved 4 solution(s) from ingredients
2026-03-13T06:19:49.883285Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:007588
2026-03-14T00:00:00+00:00 schema-defaulter-v1.0 Applied schema defaults and normalizations Added default solution name; Added default solution name; Added default solution name; Added default solution name
2026-03-17T06:30:42.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:46:08.236378+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "Acidithrix Ferrooydans Medium" to "acidithrix_ferrooydans_medium" for consistent matching
2026-05-16T09:03:07.342111+00:00 migrate_legacy_fields.py MIGRATED_LEGACY_FIELDS curation_history.date->timestamp=2
2026-06-05T07:40:30.183956+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 3 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-09-11T00:00:00-07:00 repair_togo_m1070_score15.py RESOLVED_TOGO_M1070_SCORE15 TOGO M1070 records JCM Medium 1012 with 100 ml/L UBS solution from M752/JCM 729, 10 ml/L Trace minerals from M142/JCM 151, 10 ml/L Ni-Se-W solution from M236/JCM 244, glucose, yeast extract, and distilled water. JCM 1012 adjusts the base to pH 2.5 with H2SO4, autoclaves it, then adds filter-sterilized 1 M FeSO4 solution at pH 2.0 after cooling.