modified_cellulolytic_haloarchaea_medium

CultureMech:007798 archaea COMPLEX SOLID_AGAR
Original name: Modified Cellulolytic Haloarchaea Medium

Overview

External ontology
TOGO:M1266 — Modified Cellulolytic Haloarchaea Medium
Applications
  • Microbial cultivation
pH
7.0
Notes
TOGO M1266 records the solid-agar JCM Medium 1181 preparation of Modified Cellulolytic Haloarchaea Medium with washed agar plus the same MDS, trace-element, phosphate, vitamin, NH4Cl, cellobiose, and Na2CO3 stocks used by the liquid recipe.

Composition

flowchart LR
    CultureMech_007798["modified_cellulolytic_haloarchaea_medium"]
    ing0_Distilled_water["Distilled water"]
    CultureMech_007798 --> ing0_Distilled_water
    CHEBI_15377["CHEBI:15377"]
    ing0_Distilled_water -.-> CHEBI_15377
    ing1_Agar["Agar"]
    CultureMech_007798 --> ing1_Agar
    CHEBI_2509["CHEBI:2509"]
    ing1_Agar -.-> CHEBI_2509
    ing2_Yeast_extract__BD_Difco_["Yeast extract (BD-Difco)"]
    CultureMech_007798 --> ing2_Yeast_extract__BD_Difco_

Ingredients (3)

# Ingredient Concentration Ontology Notes
1 Distilled water
H2O 18.015 g/mol
124.0 ML_PER_L CHEBI:15377
water
JCM Medium 1181 brings the MDS salt water, trace elements, and yeast extract to 958 ml with distilled water.
2 Agar 20.0 G_PER_L CHEBI:2509
agar
JCM Medium 1181 adds 20 g/L agar for solid medium.
3 Yeast extract (BD-Difco) 0.1 G_PER_L JCM Medium 1181 lists 0.1 g/L Yeast extract (BD-Difco).

Preparation

  1. Combine MDS salt water, JCM 1079 Trace element solution, yeast extract, and distilled water.
  2. Autoclave the base medium before adding sterile NH4Cl, phosphate, vitamin, and cellobiose stocks.
  3. Readjust pH to 7.0 with sterilized 10% Na2CO3 solution if necessary.

Solutions

MDS salt water

Dose: 833.0 ML_PER_L

Stock composition
IngredientConcentrationNotes
NaCl 240.0 G_PER_L JCM Medium 574 prints this component in its stock solution.
MgCl2 x 6H2O 30.0 G_PER_L JCM Medium 574 prints this component in its stock solution.
MgSO4 x 7H2O 35.0 G_PER_L JCM Medium 574 prints this component in its stock solution.
KCl 7.0 G_PER_L JCM Medium 574 prints this component in its stock solution.
1 M CaCl2 solution 5.0 ML_PER_L JCM Medium 574 adds 5.0 ml/L 1 M CaCl2 solution to MDS salt water.
Distilled water 1.0 L JCM Medium 574 prints this component in its stock solution.
JCM Medium 1181 adds 833.0 ml/L MDS salt water from JCM Medium 574.

Trace element solution

Dose: 1.0 ML_PER_L

Stock composition
IngredientConcentrationNotes
EDTA 5.0 G_PER_L JCM Medium 1079 prints this component in its stock solution.
FeSO4 x 7H2O 2.0 G_PER_L JCM Medium 1079 prints this component in its stock solution.
ZnSO4 x 7H2O 0.10 G_PER_L JCM Medium 1079 prints this component in its stock solution.
MnCl2 x 4H2O 0.03 G_PER_L JCM Medium 1079 prints this component in its stock solution.
H3BO3 0.3 G_PER_L JCM Medium 1079 prints this component in its stock solution.
CoCl2 x 6H2O 0.2 G_PER_L JCM Medium 1079 prints this component in its stock solution.
CuCl2 x 2H2O 0.01 G_PER_L JCM Medium 1079 prints this component in its stock solution.
NiCl2 x 6H2O 0.02 G_PER_L JCM Medium 1079 prints this component in its stock solution.
Na2MoO4 x 2H2O 0.03 G_PER_L JCM Medium 1079 prints this component in its stock solution.
Distilled water 1.0 L JCM Medium 1079 prints this component in its stock solution.
JCM Medium 1181 adds 1.0 ml/L Trace element solution from JCM Medium 1079.

1 M NH4Cl

Dose: 5.0 ML_PER_L

Stock composition
IngredientConcentrationNotes
NH4Cl 1.0 MOLAR JCM Medium 1181 identifies this as a 1.0 M stock solution.
JCM Medium 1181 adds 5.0 ml/L 1 M NH4Cl after autoclaving.

Potassium phosphate buffer

Dose: 2.0 ML_PER_L

Stock composition
IngredientConcentrationNotes
1 M K2HPO4 417.0 ML_PER_L JCM Medium 574 prepares Potassium phosphate buffer from 83.4 volumes of 1 M K2HPO4, 16.6 volumes of 1 M KH2PO4, and an equal volume of distilled water.
1 M KH2PO4 83.0 ML_PER_L JCM Medium 574 prepares Potassium phosphate buffer from 83.4 volumes of 1 M K2HPO4, 16.6 volumes of 1 M KH2PO4, and an equal volume of distilled water.
Distilled water 500.0 ML_PER_L JCM Medium 574 prints this component in its stock solution.
JCM Medium 1181 adds 2.0 ml/L Potassium phosphate buffer from JCM Medium 574.

Trace vitamins

Dose: 5.0 ML_PER_L

Stock composition
IngredientConcentrationNotes
Biotin 2.0 MG_PER_L JCM Medium 197 prints this component in its stock solution.
Folic acid 2.0 MG_PER_L JCM Medium 197 prints this component in its stock solution.
Pyridoxine HCl 10.0 MG_PER_L JCM Medium 197 prints this component in its stock solution.
Thiamine HCl 5.0 MG_PER_L JCM Medium 197 prints this component in its stock solution.
Riboflavin 5.0 MG_PER_L JCM Medium 197 prints this component in its stock solution.
Nicotinic acid 5.0 MG_PER_L JCM Medium 197 prints this component in its stock solution.
Calcium pantothenate 5.0 MG_PER_L JCM Medium 197 prints this component in its stock solution.
Vitamin B12 0.1 MG_PER_L JCM Medium 197 prints this component in its stock solution.
p-Aminobenzoic acid 5.0 MG_PER_L JCM Medium 197 prints this component in its stock solution.
Lipoic acid 5.0 MG_PER_L JCM Medium 197 prints this component in its stock solution.
Distilled water 1.0 L JCM Medium 197 prints this component in its stock solution.
JCM Medium 1181 adds 5.0 ml/L Trace vitamins from JCM Medium 197.

0.2 M Cellobiose solution

Dose: 30.0 ML_PER_L

Stock composition
IngredientConcentrationNotes
Cellobiose 0.2 MOLAR JCM Medium 1181 identifies this as a 0.2 M stock solution.
JCM Medium 1181 adds 30.0 ml/L 0.2 M Cellobiose solution after autoclaving.

10% Na2CO3 solution

Dose: variable ML_PER_L

Stock composition
IngredientConcentrationNotes
Na2CO3 10 PERCENT_W_V JCM Medium 1181 identifies this as a 10% w/v stock solution.
JCM Medium 1181 readjusts pH to 7.0 with sterilized 10% Na2CO3 solution if necessary.

Target organisms

No target organisms are recorded.

Provenance

TimestampCuratorActionNotes
2026-01-27T06:35:54.251212Z togo-import Imported from TOGO Medium Source: JCM, ID: M1266
2026-01-28T19:48:23.855020Z chebi-enrichment Added CHEBI ontology terms to ingredients Enriched using MicrobeMediaParam and MediaDive chemical mappings
2026-02-03T00:00:00+00:00 schema-defaulter-v1.0 Applied schema defaults and normalizations Added default concentration for ingredient: Na2CO3 solution
2026-03-09T08:04:39.435286+00:00 solution-migrator-v1.0 Migrated solutions from ingredients to solutions array Moved 6 solution(s) from ingredients
2026-03-13T06:19:51.550007Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:007798
2026-03-14T00:00:00+00:00 schema-defaulter-v1.0 Applied schema defaults and normalizations Added default solution name; Added default solution name; Added default solution name; Added default solution name; Added default solution name; Added default solution name
2026-03-17T06:30:15.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:46:09.977948+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "Modified Cellulolytic Haloarchaea Medium" to "modified_cellulolytic_haloarchaea_medium" for consistent matching
2026-05-16T09:03:08.978657+00:00 migrate_legacy_fields.py MIGRATED_LEGACY_FIELDS curation_history.date->timestamp=2
2026-06-05T07:40:31.896175+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 2 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-09-10T00:00:00-07:00 repair_togo_jcm_archaea_score15.py RESOLVED_TOGO_JCM_ARCHAEA_SCORE15 TOGO M1266 records the solid-agar JCM Medium 1181 preparation of Modified Cellulolytic Haloarchaea Medium with washed agar plus the same MDS, trace-element, phosphate, vitamin, NH4Cl, cellobiose, and Na2CO3 stocks used by the liquid recipe.