Overview
- External ontology
- TOGO:M145 — Hydrogenobacter Thermophilus Medium
- Applications
-
- Microbial cultivation
- Notes
- Source: https://togomedium.org/medium/M145 Original source: JCM - JCM_M154 Original URL: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=154
Composition
flowchart LR
CultureMech_008001["hydrogenobacter_thermophilus_medium"]
ing0_Distilled_water["Distilled water"]
CultureMech_008001 --> ing0_Distilled_water
CHEBI_15377["CHEBI:15377"]
ing0_Distilled_water -.-> CHEBI_15377
ing1_MgSO4_7H2O["MgSO4・7H2O"]
CultureMech_008001 --> ing1_MgSO4_7H2O
CHEBI_31795["CHEBI:31795"]
ing1_MgSO4_7H2O -.-> CHEBI_31795
ing2_NaCl["NaCl"]
CultureMech_008001 --> ing2_NaCl
CHEBI_26710["CHEBI:26710"]
ing2_NaCl -.-> CHEBI_26710
ing3_KH2PO4["KH2PO4"]
CultureMech_008001 --> ing3_KH2PO4
CHEBI_63036["CHEBI:63036"]
ing3_KH2PO4 -.-> CHEBI_63036
ing4_FeSO4_7H2O["FeSO4・7H2O"]
CultureMech_008001 --> ing4_FeSO4_7H2O
CHEBI_75836["CHEBI:75836"]
ing4_FeSO4_7H2O -.-> CHEBI_75836
ing5_CaCl2["CaCl2"]
CultureMech_008001 --> ing5_CaCl2
CHEBI_3312["CHEBI:3312"]
ing5_CaCl2 -.-> CHEBI_3312
ing6_Na2HPO4["Na2HPO4"]
CultureMech_008001 --> ing6_Na2HPO4
CHEBI_34683["CHEBI:34683"]
ing6_Na2HPO4 -.-> CHEBI_34683
ing7_NH4NO3["NH4NO3"]
CultureMech_008001 --> ing7_NH4NO3
CHEBI_63038["CHEBI:63038"]
ing7_NH4NO3 -.-> CHEBI_63038
ing8_NiSO4_7H2O["NiSO4・7H2O"]
CultureMech_008001 --> ing8_NiSO4_7H2O
CHEBI_53001["CHEBI:53001"]
ing8_NiSO4_7H2O -.-> CHEBI_53001
Ingredients (9)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Distilled water
H2O 18.015 g/mol
|
1 G_PER_L |
CHEBI:15377
water
|
Role: Solvating media; Properties: Defined component, Simple component, Inorganic compound |
| 2 |
MgSO4・7H2O
7H2O.Mg.O4S 246.473 g/mol
|
0.2 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
Role: Mineral source; Properties: Defined component, Simple component, Inorganic compound |
| 3 |
NaCl
Cl.Na 58.443 g/mol
|
1 G_PER_L |
CHEBI:26710
sodium chloride
|
Role: Mineral source; Properties: Inorganic compound, Simple component, Defined component |
| 4 |
KH2PO4
H2O4P.K 136.084 g/mol
|
1.5 G_PER_L |
CHEBI:63036
potassium dihydrogen phosphate
|
Role: Buffer; Properties: Defined component, Simple component, Inorganic compound |
| 5 |
FeSO4・7H2O
Fe.7H2O.O4S 278.013 g/mol
|
10 G_PER_L |
CHEBI:75836
iron(2+) sulfate heptahydrate
|
Role: Mineral source; Properties: Simple component, Defined component, Inorganic compound |
| 6 |
CaCl2
Ca.2Cl 110.984 g/mol
|
10 G_PER_L |
CHEBI:3312
calcium dichloride
|
Role: Mineral source; Properties: Simple component, Inorganic compound, Defined component |
| 7 |
Na2HPO4
HO4P.2Na 141.958 g/mol
|
4.5 G_PER_L |
CHEBI:34683
disodium hydrogenphosphate
|
Role: Buffer; Properties: Defined component, Simple component, Inorganic compound |
| 8 |
NH4NO3
H4N.NO3 80.043 g/mol
|
1 G_PER_L |
CHEBI:63038
ammonium nitrate
|
Role: Nitrogen source; Properties: Defined component, Simple component, Inorganic compound |
| 9 |
NiSO4・7H2O
Ni.O4S 154.756 g/mol
|
0.06 G_PER_L |
CHEBI:53001
nickel sulfate
|
Role: Mineral source; Properties: Defined component, Inorganic compound, Simple component |
Solutions
Trace element solution (see Medium [M120])
Dose: 2 G_PER_L
Cross-reference to Medium M120
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T06:35:54.514666Z | togo-import | Imported from TOGO Medium | Source: JCM, ID: M145 |
| 2026-01-28T19:48:21.215580Z | chebi-enrichment | Added CHEBI ontology terms to ingredients | Enriched using MicrobeMediaParam and MediaDive chemical mappings |
| 2026-03-09T08:04:35.143006+00:00 | solution-migrator-v1.0 | Migrated solutions from ingredients to solutions array | Moved 1 solution(s) from ingredients |
| 2026-03-13T06:19:52.919675Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:008001 |
| 2026-03-14T00:00:00+00:00 | schema-defaulter-v1.0 | Applied schema defaults and normalizations | Added default solution name |
| 2026-03-17T06:30:10.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:11.408012+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "Hydrogenobacter Thermophilus Medium" to "hydrogenobacter_thermophilus_medium" for consistent matching |
| 2026-05-16T09:03:37.572298+00:00 | migrate_legacy_fields.py | MIGRATED_LEGACY_FIELDS | curation_history.date->timestamp=1 |
| 2026-06-05T07:41:09.056239+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 6 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T06:57:49.181137+00:00 | mgso4-heptahydrate-term-fix-v1.0 | Corrected MgSO4·7H2O primary term grounding to heptahydrate | Re-grounded 1 heptahydrate-labelled ingredient(s) from CHEBI:32599 (generic magnesium sulfate) to CHEBI:31795 (magnesium sulfate heptahydrate). Generic/hexahydrate labels untouched. |
| 2026-06-10T07:46:59.935768+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 2 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |