modified_w_medium

CultureMech:008507 bacterial COMPLEX SOLID_AGAR
Original name: Modified W-medium

Overview

External ontology
TOGO:M1929 — Modified W-medium
Applications
  • Microbial cultivation
Notes
Source: https://togomedium.org/medium/M1929 Original source: NBRC - NBRC_M1196 Original URL: https://www.nite.go.jp/nbrc/catalogue/NBRCMediumDetailServlet?NO=1196

Composition

flowchart LR
    CultureMech_008507["modified_w_medium"]
    ing0_Distilled_water["Distilled water"]
    CultureMech_008507 --> ing0_Distilled_water
    CHEBI_15377["CHEBI:15377"]
    ing0_Distilled_water -.-> CHEBI_15377
    ing1_MgSO4_7H2O["MgSO4·7H2O"]
    CultureMech_008507 --> ing1_MgSO4_7H2O
    CHEBI_31795["CHEBI:31795"]
    ing1_MgSO4_7H2O -.-> CHEBI_31795
    ing2_KH2PO4["KH2PO4"]
    CultureMech_008507 --> ing2_KH2PO4
    CHEBI_63036["CHEBI:63036"]
    ing2_KH2PO4 -.-> CHEBI_63036
    ing3_H3BO4["H3BO4"]
    CultureMech_008507 --> ing3_H3BO4
    ing4_FeSO4_7H2O["FeSO4·7H2O"]
    CultureMech_008507 --> ing4_FeSO4_7H2O
    CHEBI_75836["CHEBI:75836"]
    ing4_FeSO4_7H2O -.-> CHEBI_75836
    ing5_ZnSO4_7H2O["ZnSO4·7H2O"]
    CultureMech_008507 --> ing5_ZnSO4_7H2O
    CHEBI_32312["CHEBI:32312"]
    ing5_ZnSO4_7H2O -.-> CHEBI_32312
    ing6__NH4_2SO4["(NH4)2SO4"]
    CultureMech_008507 --> ing6__NH4_2SO4
    CHEBI_62946["CHEBI:62946"]
    ing6__NH4_2SO4 -.-> CHEBI_62946
    ing7_CuSO4_5H2O["CuSO4·5H2O"]
    CultureMech_008507 --> ing7_CuSO4_5H2O
    CHEBI_31440["CHEBI:31440"]
    ing7_CuSO4_5H2O -.-> CHEBI_31440
    ing8_Concentrated_HCl["Concentrated HCl"]
    CultureMech_008507 --> ing8_Concentrated_HCl
    ing9_CoSO4_7H2O["CoSO4·7H2O"]
    CultureMech_008507 --> ing9_CoSO4_7H2O
    CHEBI_91244["CHEBI:91244"]
    ing9_CoSO4_7H2O -.-> CHEBI_91244
    ing10_CaCO3["CaCO3"]
    CultureMech_008507 --> ing10_CaCO3
    CHEBI_3311["CHEBI:3311"]
    ing10_CaCO3 -.-> CHEBI_3311
    ing11_MnSO4_4H2O["MnSO4·4H2O"]
    CultureMech_008507 --> ing11_MnSO4_4H2O
    CHEBI_86358["CHEBI:86358"]
    ing11_MnSO4_4H2O -.-> CHEBI_86358
    ing12_Na2HPO4_7H2O["Na2HPO4·7H2O"]
    CultureMech_008507 --> ing12_Na2HPO4_7H2O
    CHEBI_34683["CHEBI:34683"]
    ing12_Na2HPO4_7H2O -.-> CHEBI_34683
    ing13_MgO["MgO"]
    CultureMech_008507 --> ing13_MgO
    ing14_Agar__if_needed_["Agar (if needed)"]
    CultureMech_008507 --> ing14_Agar__if_needed_

Ingredients (15)

# Ingredient Concentration Ontology Notes
1 Distilled water
H2O 18.015 g/mol
1 G_PER_L CHEBI:15377
water
Role: Solvating media; Properties: Inorganic compound, Defined component, Simple component
2 MgSO4·7H2O
7H2O.Mg.O4S 246.473 g/mol
0.1 G_PER_L CHEBI:31795
magnesium sulfate heptahydrate
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component
3 KH2PO4
H2O4P.K 136.084 g/mol
0.85 G_PER_L CHEBI:63036
potassium dihydrogen phosphate
Role: Buffer; Properties: Inorganic compound, Defined component, Simple component
4 H3BO4 0.06 G_PER_L Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component
5 FeSO4·7H2O
Fe.7H2O.O4S 278.013 g/mol
9.5 G_PER_L CHEBI:75836
iron(2+) sulfate heptahydrate
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component
6 ZnSO4·7H2O
7H2O.O4S.Zn 287.558 g/mol
1.44 G_PER_L CHEBI:32312
zinc sulfate heptahydrate
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component
7 (NH4)2SO4
2H4N.O4S 132.141 g/mol
0.5 G_PER_L CHEBI:62946
ammonium sulfate
Role: Nitrogen source; Properties: Inorganic compound, Defined component, Simple component
8 CuSO4·5H2O
Cu.5H2O.O4S 249.684 g/mol
0.25 G_PER_L CHEBI:31440
copper(II) sulfate pentahydrate
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component
9 Concentrated HCl 51.3 G_PER_L Role: Solvating media; Properties: Inorganic compound, Defined component, Simple component
10 CoSO4·7H2O
Co.7H2O.O4S 281.101 g/mol
0.28 G_PER_L CHEBI:91244
cobalt(2+) sulfate heptahydrate
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component
11 CaCO3
CO3.Ca 100.086 g/mol
2 G_PER_L CHEBI:3311
calcium carbonate
Role: Mineral source, Protective agent; Properties: Inorganic compound, Defined component, Simple component
12 MnSO4·4H2O
4H2O.Mn.O4S 223.061 g/mol
1.12 G_PER_L CHEBI:86358
manganese(II) sulfate tetrahydrate
Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component
13 Na2HPO4·7H2O
HO4P.2Na 141.958 g/mol
4.9 G_PER_L CHEBI:34683
disodium hydrogenphosphate
Role: Buffer; Properties: Inorganic compound, Defined component, Simple component
14 MgO 10.75 G_PER_L Role: Mineral source; Properties: Inorganic compound, Defined component, Simple component
15 Agar (if needed) 15 G_PER_L Role: Solidifying component

Solutions

Substrates*

Dose: 10 MILLIMOLAR

Role: Carbon source; Properties: Organic compound, Defined component, Simple component

Target organisms

No target organisms are recorded.

Provenance

TimestampCuratorActionNotes
2026-01-27T06:35:58.689000Z togo-import Imported from TOGO Medium Source: NBRC, ID: M1929
2026-01-28T19:48:08.013040Z chebi-enrichment Added CHEBI ontology terms to ingredients Enriched using MicrobeMediaParam and MediaDive chemical mappings
2026-03-09T08:04:12.882491+00:00 solution-migrator-v1.0 Migrated solutions from ingredients to solutions array Moved 1 solution(s) from ingredients
2026-03-13T06:19:57.621237Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:008507
2026-03-14T00:00:00+00:00 schema-defaulter-v1.0 Applied schema defaults and normalizations Added default solution name
2026-03-17T06:29:41.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:46:16.239247+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "Modified W-medium" to "modified_w_medium" for consistent matching
2026-05-16T09:04:26.431484+00:00 migrate_legacy_fields.py MIGRATED_LEGACY_FIELDS curation_history.date->timestamp=1
2026-06-05T07:41:38.016516+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 7 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T06:58:26.971998+00:00 mgso4-heptahydrate-term-fix-v1.0 Corrected MgSO4·7H2O primary term grounding to heptahydrate Re-grounded 1 heptahydrate-labelled ingredient(s) from CHEBI:32599 (generic magnesium sulfate) to CHEBI:31795 (magnesium sulfate heptahydrate). Generic/hexahydrate labels untouched.
2026-06-10T07:47:09.032749+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 2 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.