Overview
- External ontology
- TOGO:M2424 — Bacillus Medium
- Applications
-
- Microbial cultivation
- Notes
- Source: https://togomedium.org/medium/M2424 Original URL: https://www.atcc.org/~/media/6B7694171223471DB20BE5BDC1E3F1BF.ashx
Composition
flowchart LR
CultureMech_009007["bacillus_medium"]
ing0_K2HPO4["K2HPO4"]
CultureMech_009007 --> ing0_K2HPO4
CHEBI_131527["CHEBI:131527"]
ing0_K2HPO4 -.-> CHEBI_131527
ing1_Glycerol["Glycerol"]
CultureMech_009007 --> ing1_Glycerol
CHEBI_17754["CHEBI:17754"]
ing1_Glycerol -.-> CHEBI_17754
ing2_MgSO4["MgSO4"]
CultureMech_009007 --> ing2_MgSO4
CHEBI_32599["CHEBI:32599"]
ing2_MgSO4 -.-> CHEBI_32599
ing3_Tap_water["Tap water"]
CultureMech_009007 --> ing3_Tap_water
CHEBI_15377["CHEBI:15377"]
ing3_Tap_water -.-> CHEBI_15377
ing4_Ferric_Ammonium_Citrate["Ferric Ammonium Citrate"]
CultureMech_009007 --> ing4_Ferric_Ammonium_Citrate
CHEBI_31604["CHEBI:31604"]
ing4_Ferric_Ammonium_Citrate -.-> CHEBI_31604
ing5_L_Glutamic_Acid["L-Glutamic Acid"]
CultureMech_009007 --> ing5_L_Glutamic_Acid
CHEBI_16015["CHEBI:16015"]
ing5_L_Glutamic_Acid -.-> CHEBI_16015
ing6_Citric_Acid["Citric Acid"]
CultureMech_009007 --> ing6_Citric_Acid
CHEBI_53258["CHEBI:53258"]
ing6_Citric_Acid -.-> CHEBI_53258
Ingredients (7)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
K2HPO4
HO4P.2K 174.174 g/mol
|
0.5 G_PER_L |
CHEBI:131527
dipotassium hydrogen phosphate
|
Role: Buffer; Properties: Simple component, Inorganic compound, Defined component |
| 2 |
Glycerol
C3H8O3 92.094 g/mol
|
20 G_PER_L |
CHEBI:17754
glycerol
|
Role: Carbon source; Properties: Defined component, Simple component, Organic compound |
| 3 |
MgSO4
Mg.O4S 120.368 g/mol
|
0.5 G_PER_L |
CHEBI:32599
magnesium sulfate
|
Role: Mineral source; Properties: Defined component, Simple component, Inorganic compound |
| 4 |
Tap water
H2O 18.015 g/mol
|
1000 G_PER_L |
CHEBI:15377
water
|
Role: Solvating media; Properties: Undefined component |
| 5 | Ferric Ammonium Citrate | 0.5 G_PER_L |
CHEBI:31604
ferric ammonium citrate
|
Role: Nitrogen source; Properties: Organic compound, Simple component, Defined component |
| 6 |
L-Glutamic Acid
C5H9NO4 147.13 g/mol
|
4 G_PER_L |
CHEBI:16015
L-glutamic acid
|
Role: Nitrogen source; Properties: Defined component, Simple component, Organic compound |
| 7 |
Citric Acid
C6H5O7.3Na 258.069 g/mol
|
2 G_PER_L |
CHEBI:53258
sodium citrate
|
Properties: Defined component, Organic compound, Simple component |
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T06:35:56.493194Z | togo-import | Imported from TOGO Medium | Source: TOGO, ID: M2424 |
| 2026-01-28T19:48:08.409522Z | chebi-enrichment | Added CHEBI ontology terms to ingredients | Enriched using MicrobeMediaParam and MediaDive chemical mappings |
| 2026-03-13T06:20:01.935775Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:009007 |
| 2026-03-17T06:29:42.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:20.687186+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "Bacillus Medium" to "bacillus_medium" for consistent matching |
| 2026-06-05T07:40:50.294035+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 7 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-08T23:19:35.967891+00:00 | chebi-regrounding-v1.0 | Corrected CHEBI ingredient grounding (audit G21/G22) | Re-grounded 2 term reference(s) to the correct CHEBI (see reports/chebi_grounding_audit.md). Label-conditional fixes for pyridoxine/pyridoxamine, glycerol, MnSO4, Ca(NO3)2, selenate; casamino acids de-grounded (mixture, no single CHEBI). |
| 2026-06-10T07:46:53.725809+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 2 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |