Overview
- External ontology
- TOGO:M2457 — Pyrobaculum Calidifontis Medium
- Applications
-
- Microbial cultivation
- Notes
- Source: https://togomedium.org/medium/M2457 Original URL: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium1090.pdf
Composition
flowchart LR
CultureMech_009035["pyrobaculum_calidifontis_medium"]
ing0_Distilled_water["Distilled water"]
CultureMech_009035 --> ing0_Distilled_water
CHEBI_15377["CHEBI:15377"]
ing0_Distilled_water -.-> CHEBI_15377
ing1_Yeast_extract["Yeast extract"]
CultureMech_009035 --> ing1_Yeast_extract
ing2_Na2S2O3_x_5_H2O["Na2S2O3 x 5 H2O"]
CultureMech_009035 --> ing2_Na2S2O3_x_5_H2O
CHEBI_32150["CHEBI:32150"]
ing2_Na2S2O3_x_5_H2O -.-> CHEBI_32150
ing3_Tryptone__BD_Bacto_["Tryptone (BD Bacto)"]
CultureMech_009035 --> ing3_Tryptone__BD_Bacto_
ing4_NaOH["NaOH"]
CultureMech_009035 --> ing4_NaOH
CHEBI_32145["CHEBI:32145"]
ing4_NaOH -.-> CHEBI_32145
Ingredients (5)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Distilled water
H2O 18.015 g/mol
|
1000 G_PER_L |
CHEBI:15377
water
|
Role: Solvating media; Properties: Defined component, Inorganic compound, Simple component |
| 2 | Yeast extract | 1 G_PER_L | Role: Nutrient source; Properties: Undefined component | |
| 3 |
Na2S2O3 x 5 H2O
5H2O.2Na.O3S2 248.186 g/mol
|
3 G_PER_L |
CHEBI:32150
sodium thiosulfate pentahydrate
|
Properties: Defined component, Inorganic compound, Simple component |
| 4 | Tryptone (BD Bacto) | 10 G_PER_L | Properties: Undefined component | |
| 5 |
NaOH
HO.Na 39.997 g/mol
|
variable VARIABLE |
CHEBI:32145
sodium hydroxide
|
Properties: Defined component, Inorganic compound, Solution |
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T06:35:56.528603Z | togo-import | Imported from TOGO Medium | Source: TOGO, ID: M2457 |
| 2026-01-28T19:48:13.962827Z | chebi-enrichment | Added CHEBI ontology terms to ingredients | Enriched using MicrobeMediaParam and MediaDive chemical mappings |
| 2026-02-03T00:00:00+00:00 | schema-defaulter-v1.0 | Applied schema defaults and normalizations | Added default concentration for ingredient: NaOH |
| 2026-03-13T06:20:02.095483Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:009035 |
| 2026-03-17T06:29:55.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:20.858123+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "Pyrobaculum Calidifontis Medium" to "pyrobaculum_calidifontis_medium" for consistent matching |
| 2026-05-16T09:03:13.596536+00:00 | migrate_legacy_fields.py | MIGRATED_LEGACY_FIELDS | curation_history.date->timestamp=1 |
| 2026-06-05T07:40:36.867490+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 3 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |