Overview
- External ontology
- TOGO:M3061 — MC medium
- Applications
-
- Microbial cultivation
- Notes
- Source: https://togomedium.org/medium/M3061 Original source: NBRC - NBRC_M1632 Original URL: https://www.nite.go.jp/nbrc/catalogue/NBRCMediumDetailServlet?NO=1632
Composition
flowchart LR
CultureMech_009576["mc_medium"]
ing0_Distilled_water["Distilled water"]
CultureMech_009576 --> ing0_Distilled_water
CHEBI_15377["CHEBI:15377"]
ing0_Distilled_water -.-> CHEBI_15377
ing1_MgSO4_7H2O["MgSO4·7H2O"]
CultureMech_009576 --> ing1_MgSO4_7H2O
CHEBI_31795["CHEBI:31795"]
ing1_MgSO4_7H2O -.-> CHEBI_31795
ing2_NaCl["NaCl"]
CultureMech_009576 --> ing2_NaCl
CHEBI_26710["CHEBI:26710"]
ing2_NaCl -.-> CHEBI_26710
ing3_CaCl2_2H2O["CaCl2·2H2O"]
CultureMech_009576 --> ing3_CaCl2_2H2O
CHEBI_86158["CHEBI:86158"]
ing3_CaCl2_2H2O -.-> CHEBI_86158
ing4_KH2PO4["KH2PO4"]
CultureMech_009576 --> ing4_KH2PO4
CHEBI_63036["CHEBI:63036"]
ing4_KH2PO4 -.-> CHEBI_63036
ing5_K2HPO4["K2HPO4"]
CultureMech_009576 --> ing5_K2HPO4
CHEBI_131527["CHEBI:131527"]
ing5_K2HPO4 -.-> CHEBI_131527
ing6__NH4_2SO4["(NH4)2SO4"]
CultureMech_009576 --> ing6__NH4_2SO4
CHEBI_62946["CHEBI:62946"]
ing6__NH4_2SO4 -.-> CHEBI_62946
ing7_H3BO3["H3BO3"]
CultureMech_009576 --> ing7_H3BO3
CHEBI_33118["CHEBI:33118"]
ing7_H3BO3 -.-> CHEBI_33118
ing8_CoCl2_6H2O["CoCl2·6H2O"]
CultureMech_009576 --> ing8_CoCl2_6H2O
CHEBI_35696["CHEBI:35696"]
ing8_CoCl2_6H2O -.-> CHEBI_35696
ing9_ZnSO4_7H2O["ZnSO4·7H2O"]
CultureMech_009576 --> ing9_ZnSO4_7H2O
CHEBI_32312["CHEBI:32312"]
ing9_ZnSO4_7H2O -.-> CHEBI_32312
ing10_CuSO4_5H2O["CuSO4·5H2O"]
CultureMech_009576 --> ing10_CuSO4_5H2O
CHEBI_31440["CHEBI:31440"]
ing10_CuSO4_5H2O -.-> CHEBI_31440
ing11_MnSO4_5H2O["MnSO4·5H2O"]
CultureMech_009576 --> ing11_MnSO4_5H2O
CHEBI_131524["CHEBI:131524"]
ing11_MnSO4_5H2O -.-> CHEBI_131524
ing12__NH4_6Mo7O4_4H2O["(NH4)6Mo7O4·4H2O"]
CultureMech_009576 --> ing12__NH4_6Mo7O4_4H2O
Ingredients (13)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Distilled water
H2O 18.015 g/mol
|
1 G_PER_L |
CHEBI:15377
water
|
Role: Solvating media; Properties: Defined component, Inorganic compound, Simple component |
| 2 |
MgSO4·7H2O
7H2O.Mg.O4S 246.473 g/mol
|
0.1 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
Role: Mineral source; Properties: Inorganic compound, Simple component, Defined component |
| 3 |
NaCl
Cl.Na 58.443 g/mol
|
0.01 G_PER_L |
CHEBI:26710
sodium chloride
|
Role: Mineral source; Properties: Inorganic compound, Simple component, Defined component |
| 4 |
CaCl2·2H2O
Ca.2Cl.2H2O 147.014 g/mol
|
0.02 G_PER_L |
CHEBI:86158
calcium chloride dihydrate
|
Role: Mineral source; Properties: Defined component, Simple component, Inorganic compound |
| 5 |
KH2PO4
H2O4P.K 136.084 g/mol
|
0.4 G_PER_L |
CHEBI:63036
potassium dihydrogen phosphate
|
Role: Buffer; Properties: Inorganic compound, Simple component, Defined component |
| 6 |
K2HPO4
HO4P.2K 174.174 g/mol
|
1.2 G_PER_L |
CHEBI:131527
dipotassium hydrogen phosphate
|
Role: Buffer; Properties: Defined component, Simple component, Inorganic compound |
| 7 |
(NH4)2SO4
2H4N.O4S 132.141 g/mol
|
0.5 G_PER_L |
CHEBI:62946
ammonium sulfate
|
Role: Nitrogen source; Properties: Defined component, Simple component, Inorganic compound |
| 8 |
H3BO3
H3BO3 61.833 g/mol
|
variable VARIABLE |
CHEBI:33118
boric acid
|
Role: Mineral source; Properties: Defined component, Inorganic compound, Simple component |
| 9 |
CoCl2·6H2O
2Cl.Co 129.839 g/mol
|
variable VARIABLE |
CHEBI:35696
cobalt dichloride
|
Role: Mineral source; Properties: Defined component, Simple component, Inorganic compound |
| 10 |
ZnSO4·7H2O
7H2O.O4S.Zn 287.558 g/mol
|
variable VARIABLE |
CHEBI:32312
zinc sulfate heptahydrate
|
Role: Mineral source; Properties: Defined component, Inorganic compound, Simple component |
| 11 |
CuSO4·5H2O
Cu.5H2O.O4S 249.684 g/mol
|
variable VARIABLE |
CHEBI:31440
copper(II) sulfate pentahydrate
|
Role: Mineral source; Properties: Defined component, Inorganic compound, Simple component |
| 12 |
MnSO4·5H2O
5H2O.Mn.O4S 241.076 g/mol
|
variable VARIABLE |
CHEBI:131524
manganese(II) sulfate pentahydrate
|
Role: Mineral source; Properties: Simple component, Defined component, Inorganic compound |
| 13 | (NH4)6Mo7O4·4H2O | variable VARIABLE | Role: Mineral source; Properties: Defined component, Simple component, Inorganic compound |
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T06:35:59.255666Z | togo-import | Imported from TOGO Medium | Source: NBRC, ID: M3061 |
| 2026-01-28T19:48:24.998399Z | chebi-enrichment | Added CHEBI ontology terms to ingredients | Enriched using MicrobeMediaParam and MediaDive chemical mappings |
| 2026-02-03T00:00:00+00:00 | schema-defaulter-v1.0 | Applied schema defaults and normalizations | Added default concentration for ingredient: H3BO3; Added default concentration for ingredient: CoCl2·6H2O; Added default concentration for ingredient: ZnSO4·7H2O; Added default concentration for ingredient: CuSO4·5H2O; Added default concentration for ingredient: MnSO4·5H2O; Added default concentration for ingredient: (NH4)6Mo7O4·4H2O |
| 2026-03-13T06:20:07.021107Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:009576 |
| 2026-03-17T06:30:18.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:26.045756+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "MC medium" to "mc_medium" for consistent matching |
| 2026-05-16T09:03:40.650939+00:00 | migrate_legacy_fields.py | MIGRATED_LEGACY_FIELDS | curation_history.date->timestamp=1 |
| 2026-06-05T07:41:13.403654+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 11 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T06:57:52.075051+00:00 | mgso4-heptahydrate-term-fix-v1.0 | Corrected MgSO4·7H2O primary term grounding to heptahydrate | Re-grounded 1 heptahydrate-labelled ingredient(s) from CHEBI:32599 (generic magnesium sulfate) to CHEBI:31795 (magnesium sulfate heptahydrate). Generic/hexahydrate labels untouched. |
| 2026-06-10T07:47:01.062373+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 4 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |