Overview
- External ontology
- TOGO:M3062 — GYP for Acetic acid bacteria (pH 6.0, Glucose 30g)
- Applications
-
- Microbial cultivation
- pH
- 6.0
- Notes
- TOGO M3062 imports NBRC Medium 1636 as GYP for Acetic acid bacteria (pH 6.0, Glucose 30g). NBRC 1636 lists 30 g glucose, 5 g Yeast Extract, 2 g Peptone, 1 L distilled water, 20 g agar if needed, and pH 6.0.
Composition
flowchart LR
CultureMech_009577["gyp_for_acetic_acid_bacteria_ph_6_0_glucose_30g"]
ing0_Glucose["Glucose"]
CultureMech_009577 --> ing0_Glucose
CHEBI_17234["CHEBI:17234"]
ing0_Glucose -.-> CHEBI_17234
ing1_Yeast_Extract["Yeast Extract"]
CultureMech_009577 --> ing1_Yeast_Extract
ing2_Peptone["Peptone"]
CultureMech_009577 --> ing2_Peptone
ing3_Distilled_water["Distilled water"]
CultureMech_009577 --> ing3_Distilled_water
CHEBI_15377["CHEBI:15377"]
ing3_Distilled_water -.-> CHEBI_15377
ing4_Agar__if_needed_["Agar (if needed)"]
CultureMech_009577 --> ing4_Agar__if_needed_
CHEBI_2509["CHEBI:2509"]
ing4_Agar__if_needed_ -.-> CHEBI_2509
Ingredients (5)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Glucose
C6H12O6 180.156 g/mol
|
30.0 G_PER_L |
CHEBI:17234
glucose
|
NBRC Medium 1636 lists 30 g/L glucose. |
| 2 | Yeast Extract | 5.0 G_PER_L |
FOODON:03315426
yeast extract
|
NBRC Medium 1636 lists 5 g/L Yeast Extract. |
| 3 | Peptone | 2.0 G_PER_L | NBRC Medium 1636 lists 2 g/L Peptone; this protein digest is retained as an opaque complex component. | |
| 4 |
Distilled water
H2O 18.015 g/mol
|
1.0 L |
CHEBI:15377
water
|
NBRC Medium 1636 lists 1 L distilled water. |
| 5 | Agar (if needed) | 20.0 G_PER_L |
CHEBI:2509
agar
|
NBRC Medium 1636 lists 20 g/L agar if needed. |
Preparation
- Adjust pH to 6.0.
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T06:35:59.257169Z | togo-import | Imported from TOGO Medium | Source: NBRC, ID: M3062 |
| 2026-01-28T19:48:12.083478Z | chebi-enrichment | Added CHEBI ontology terms to ingredients | Enriched using MicrobeMediaParam and MediaDive chemical mappings |
| 2026-03-09T08:04:19.933982+00:00 | solution-migrator-v1.0 | Migrated solutions from ingredients to solutions array | Moved 1 solution(s) from ingredients |
| 2026-03-13T06:20:07.026862Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:009577 |
| 2026-03-14T00:00:00+00:00 | schema-defaulter-v1.0 | Applied schema defaults and normalizations | Added default solution name |
| 2026-03-17T06:29:51.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:26.051781+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "GYP for Acetic acid bacteria (pH 6.0, Glucose 30g)" to "gyp_for_acetic_acid_bacteria_ph_6_0_glucose_30g" for consistent matching |
| 2026-05-16T09:03:36.101528+00:00 | migrate_legacy_fields.py | MIGRATED_LEGACY_FIELDS | curation_history.date->timestamp=1 |
| 2026-06-05T07:41:06.888101+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 2 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-09-12T00:00:00-07:00 | repair_togo_m3062_gyp_acetic_score15.py | RESOLVED_TOGO_M3062_GYP_ACETIC_SCORE15 | TOGO M3062 imports NBRC Medium 1636 as GYP for Acetic acid bacteria (pH 6.0, Glucose 30g). NBRC 1636 lists 30 g glucose, 5 g Yeast Extract, 2 g Peptone, 1 L distilled water, 20 g agar if needed, and pH 6.0. Corrected the imported distilled-water unit, restored the migrated agar row to the ingredient list, added the NBRC pH, and marked the NBRC formula as curated. |