Overview
- External ontology
- TOGO:M561 — Alkaline LB Agar
- Applications
-
- Microbial cultivation
- Notes
- Source: https://togomedium.org/medium/M561 Original source: JCM - JCM_M557 Original URL: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=557
Composition
flowchart LR
CultureMech_009956["alkaline_lb_agar"]
ing0_Distilled_water["Distilled water"]
CultureMech_009956 --> ing0_Distilled_water
CHEBI_15377["CHEBI:15377"]
ing0_Distilled_water -.-> CHEBI_15377
ing1_NaCl["NaCl"]
CultureMech_009956 --> ing1_NaCl
CHEBI_26710["CHEBI:26710"]
ing1_NaCl -.-> CHEBI_26710
ing2_Na2CO3["Na2CO3"]
CultureMech_009956 --> ing2_Na2CO3
CHEBI_29377["CHEBI:29377"]
ing2_Na2CO3 -.-> CHEBI_29377
ing3_Agar["Agar"]
CultureMech_009956 --> ing3_Agar
CHEBI_2509["CHEBI:2509"]
ing3_Agar -.-> CHEBI_2509
ing4_Yeast_extract__BD_Difco_["Yeast extract (BD-Difco)"]
CultureMech_009956 --> ing4_Yeast_extract__BD_Difco_
ing5_Tryptone__BD_Difco_["Tryptone (BD-Difco)"]
CultureMech_009956 --> ing5_Tryptone__BD_Difco_
Ingredients (6)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Distilled water
H2O 18.015 g/mol
|
1 G_PER_L |
CHEBI:15377
water
|
Role: Solvating media; Properties: Defined component, Inorganic compound, Simple component |
| 2 |
NaCl
Cl.Na 58.443 g/mol
|
15 G_PER_L |
CHEBI:26710
sodium chloride
|
Role: Mineral source; Properties: Defined component, Inorganic compound, Simple component |
| 3 |
Na2CO3
CO3.2Na 105.988 g/mol
|
5 G_PER_L |
CHEBI:29377
sodium carbonate
|
Role: Buffer; Properties: Simple component, Inorganic compound, Defined component |
| 4 | Agar | 15 G_PER_L |
CHEBI:2509
agar
|
Role: Solidifying component |
| 5 | Yeast extract (BD-Difco) | 5 G_PER_L | Properties: Undefined component | |
| 6 | Tryptone (BD-Difco) | 10 G_PER_L | Properties: Undefined component |
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T06:35:55.305287Z | togo-import | Imported from TOGO Medium | Source: JCM, ID: M561 |
| 2026-01-28T19:48:29.621782Z | chebi-enrichment | Added CHEBI ontology terms to ingredients | Enriched using MicrobeMediaParam and MediaDive chemical mappings |
| 2026-03-13T06:20:10.280232Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:009956 |
| 2026-03-17T06:30:28.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:29.210579+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "Alkaline LB Agar" to "alkaline_lb_agar" for consistent matching |
| 2026-06-05T07:40:42.554011+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 4 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T07:46:51.011523+00:00 | primary-term-label-canonicalization-v1.0 | Canonicalized primary term label to OBO canonical (OAK) | 1 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi. |