Overview
- External ontology
- TOGO:M60 — GYP-Sodium Acetate-Mineral Salts Broth
- Applications
-
- Microbial cultivation
- Notes
- Source: https://togomedium.org/medium/M60 Original source: JCM - JCM_M68 Original URL: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=68
Composition
flowchart LR
CultureMech_010009["gyp_sodium_acetate_mineral_salts_broth"]
ing0_Distilled_water["Distilled water"]
CultureMech_010009 --> ing0_Distilled_water
CHEBI_15377["CHEBI:15377"]
ing0_Distilled_water -.-> CHEBI_15377
ing1_MgSO4_7H2O["MgSO4・7H2O"]
CultureMech_010009 --> ing1_MgSO4_7H2O
CHEBI_31795["CHEBI:31795"]
ing1_MgSO4_7H2O -.-> CHEBI_31795
ing2_NaCl["NaCl"]
CultureMech_010009 --> ing2_NaCl
CHEBI_26710["CHEBI:26710"]
ing2_NaCl -.-> CHEBI_26710
ing3_FeSO4_7H2O["FeSO4・7H2O"]
CultureMech_010009 --> ing3_FeSO4_7H2O
CHEBI_75836["CHEBI:75836"]
ing3_FeSO4_7H2O -.-> CHEBI_75836
ing4_Sodium_acetate["Sodium acetate"]
CultureMech_010009 --> ing4_Sodium_acetate
CHEBI_32954["CHEBI:32954"]
ing4_Sodium_acetate -.-> CHEBI_32954
ing5_MnSO4_xH2O["MnSO4・xH2O"]
CultureMech_010009 --> ing5_MnSO4_xH2O
CHEBI_86360["CHEBI:86360"]
ing5_MnSO4_xH2O -.-> CHEBI_86360
ing6_Glucose["Glucose"]
CultureMech_010009 --> ing6_Glucose
CHEBI_17234["CHEBI:17234"]
ing6_Glucose -.-> CHEBI_17234
ing7_Yeast_extract__BD_Difco_["Yeast extract (BD-Difco)"]
CultureMech_010009 --> ing7_Yeast_extract__BD_Difco_
ing8_Bacto_peptone__BD_Difco_["Bacto peptone (BD-Difco)"]
CultureMech_010009 --> ing8_Bacto_peptone__BD_Difco_
Ingredients (9)
| # | Ingredient | Concentration | Ontology | Notes |
|---|---|---|---|---|
| 1 |
Distilled water
H2O 18.015 g/mol
|
1 G_PER_L |
CHEBI:15377
water
|
Role: Solvating media; Properties: Defined component, Simple component, Inorganic compound |
| 2 |
MgSO4・7H2O
7H2O.Mg.O4S 246.473 g/mol
|
0.2 G_PER_L |
CHEBI:31795
magnesium sulfate heptahydrate
|
Role: Mineral source; Properties: Inorganic compound, Simple component, Defined component |
| 3 |
NaCl
Cl.Na 58.443 g/mol
|
10 G_PER_L |
CHEBI:26710
sodium chloride
|
Role: Mineral source; Properties: Simple component, Inorganic compound, Defined component |
| 4 |
FeSO4・7H2O
Fe.7H2O.O4S 278.013 g/mol
|
10 G_PER_L |
CHEBI:75836
iron(2+) sulfate heptahydrate
|
Role: Mineral source; Properties: Defined component, Inorganic compound, Simple component |
| 5 |
Sodium acetate
C2H3O2.Na 82.034 g/mol
|
10 G_PER_L |
CHEBI:32954
sodium acetate
|
Role: Buffer; Properties: Simple component, Organic compound, Defined component |
| 6 |
MnSO4・xH2O
Mn.O4S 151.001 g/mol
|
10 G_PER_L |
CHEBI:86360
manganese(II) sulfate
|
Role: Mineral source; Properties: Defined component, Inorganic compound, Simple component |
| 7 |
Glucose
C6H12O6 180.156 g/mol
|
10 G_PER_L |
CHEBI:17234
glucose
|
Role: Carbon source; Properties: Organic compound, Simple component, Defined component |
| 8 | Yeast extract (BD-Difco) | 10 G_PER_L | Properties: Undefined component | |
| 9 | Bacto peptone (BD-Difco) | 10 G_PER_L | Properties: Undefined component |
Target organisms
No target organisms are recorded.
Provenance
| Timestamp | Curator | Action | Notes |
|---|---|---|---|
| 2026-01-27T06:35:55.380780Z | togo-import | Imported from TOGO Medium | Source: JCM, ID: M60 |
| 2026-01-28T19:48:38.525829Z | chebi-enrichment | Added CHEBI ontology terms to ingredients | Enriched using MicrobeMediaParam and MediaDive chemical mappings |
| 2026-03-13T06:20:10.689877Z | culturemech-id-assigner-v1.0 | Assigned CultureMech ID | Assigned stable identifier: CultureMech:010009 |
| 2026-03-17T06:30:47.000000Z | mediaingredientmech-enrichment-v1.0 | Added MediaIngredientMech links | Linked ingredients to MediaIngredientMech identifiers |
| 2026-03-17T19:46:29.618206+00:00 | normalize_media_names_to_snake_case.py | NAME_NORMALIZED | Normalized name from "GYP-Sodium Acetate-Mineral Salts Broth" to "gyp_sodium_acetate_mineral_salts_broth" for consistent matching |
| 2026-06-05T07:40:42.976288+00:00 | mim-legacy-to-chebi-migration-v1.0 | Refreshed legacy MediaIngredientMech links to CHEBI keying | Replaced 4 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme. |
| 2026-06-10T06:57:31.811112+00:00 | mgso4-heptahydrate-term-fix-v1.0 | Corrected MgSO4·7H2O primary term grounding to heptahydrate | Re-grounded 1 heptahydrate-labelled ingredient(s) from CHEBI:32599 (generic magnesium sulfate) to CHEBI:31795 (magnesium sulfate heptahydrate). Generic/hexahydrate labels untouched. |