nutrient_broth

CultureMech:010086 bacterial COMPLEX LIQUID
Original name: Nutrient Broth

Overview

External ontology
TOGO:M681 — Nutrient Broth
Applications
  • Microbial cultivation
pH
7.0
Notes
JCM Medium 663 Nutrient Broth lists 5.0 g Peptone, 3.0 g Beef extract, and 1.0 L Distilled water, then adjusts pH to 7.0.

Composition

flowchart LR
    CultureMech_010086["nutrient_broth"]
    ing0_Peptone["Peptone"]
    CultureMech_010086 --> ing0_Peptone
    ing1_Beef_extract["Beef extract"]
    CultureMech_010086 --> ing1_Beef_extract
    ing2_Distilled_water["Distilled water"]
    CultureMech_010086 --> ing2_Distilled_water
    CHEBI_15377["CHEBI:15377"]
    ing2_Distilled_water -.-> CHEBI_15377

Ingredients (3)

# Ingredient Concentration Ontology Notes
1 Peptone 5.0 G_PER_L MICRO:0000178 (source link unavailable)
peptone
TOGO M681 / JCM Medium 663 lists 5.0 g/L Peptone.
2 Beef extract 3.0 G_PER_L FOODON:03302088
beef extract
TOGO M681 / JCM Medium 663 lists 3.0 g/L Beef extract.
3 Distilled water
H2O 18.015 g/mol
1.0 L CHEBI:15377
water
TOGO M681 / JCM Medium 663 lists 1.0 L Distilled water.

Preparation

  1. Dissolve 5.0 g Peptone and 3.0 g Beef extract in 1.0 L distilled water.
  2. Adjust pH to 7.0.
  3. Autoclave at 121 C for 15 min.

Target organisms

No target organisms are recorded.

Provenance

TimestampCuratorActionNotes
2026-01-27T06:35:55.519876Z togo-import Imported from TOGO Medium Source: JCM, ID: M681
2026-01-28T19:48:29.123817Z chebi-enrichment Added CHEBI ontology terms to ingredients Enriched using MicrobeMediaParam and MediaDive chemical mappings
2026-03-13T06:20:11.197453Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:010086
2026-03-17T06:30:27.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:46:30.122917+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "Nutrient Broth" to "nutrient_broth" for consistent matching
2026-06-05T07:40:43.513701+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 1 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-09-11T00:00:00-07:00 repair_togo_m681_score15.py RESOLVED_TOGO_M681_SCORE15 Corrected the imported distilled-water unit, added pH 7.0, grounded Peptone and Beef extract to complex ontology terms, kept water grounded to CHEBI, and added JCM's default autoclaving instruction.