ferrovum_medium

CultureMech:010313 bacterial COMPLEX LIQUID
Original name: Ferrovum Medium

Overview

External ontology
TOGO:M896 — Ferrovum Medium
Applications
  • Microbial cultivation
Notes
Source: https://togomedium.org/medium/M896 Original source: JCM - JCM_M860 Original URL: https://www.jcm.riken.jp/cgi-bin/jcm/jcm_grmd?GRMD=860

Composition

flowchart LR
    CultureMech_010313["ferrovum_medium"]
    ing0_Distilled_water["Distilled water"]
    CultureMech_010313 --> ing0_Distilled_water
    CHEBI_15377["CHEBI:15377"]
    ing0_Distilled_water -.-> CHEBI_15377
    ing1_MgSO4_7H2O["MgSO4・7H2O"]
    CultureMech_010313 --> ing1_MgSO4_7H2O
    CHEBI_31795["CHEBI:31795"]
    ing1_MgSO4_7H2O -.-> CHEBI_31795
    ing2_H2SO4["H2SO4"]
    CultureMech_010313 --> ing2_H2SO4
    CHEBI_26836["CHEBI:26836"]
    ing2_H2SO4 -.-> CHEBI_26836
    ing3_K2HPO4["K2HPO4"]
    CultureMech_010313 --> ing3_K2HPO4
    CHEBI_131527["CHEBI:131527"]
    ing3_K2HPO4 -.-> CHEBI_131527
    ing4_KCl["KCl"]
    CultureMech_010313 --> ing4_KCl
    CHEBI_32588["CHEBI:32588"]
    ing4_KCl -.-> CHEBI_32588
    ing5__NH4_2SO4["(NH4)2SO4"]
    CultureMech_010313 --> ing5__NH4_2SO4
    CHEBI_62946["CHEBI:62946"]
    ing5__NH4_2SO4 -.-> CHEBI_62946
    ing6_Na2SO4["Na2SO4"]
    CultureMech_010313 --> ing6_Na2SO4
    CHEBI_32149["CHEBI:32149"]
    ing6_Na2SO4 -.-> CHEBI_32149
    ing7_Ca_NO3_2_4H2O["Ca(NO3)2・4H2O"]
    CultureMech_010313 --> ing7_Ca_NO3_2_4H2O
    CHEBI_86159["CHEBI:86159"]
    ing7_Ca_NO3_2_4H2O -.-> CHEBI_86159

Ingredients (8)

# Ingredient Concentration Ontology Notes
1 Distilled water
H2O 18.015 g/mol
921.0 G_PER_L CHEBI:15377
water
Role: Solvating media; Properties: Simple component, Inorganic compound, Defined component [Merged 2 duplicates: 920.0, 1.0]
2 MgSO4・7H2O
7H2O.Mg.O4S 246.473 g/mol
12.32 G_PER_L CHEBI:31795
magnesium sulfate heptahydrate
Role: Mineral source; Properties: Simple component, Defined component, Inorganic compound
3 H2SO4
H2O4S 98.079 g/mol
variable VARIABLE CHEBI:26836
sulfuric acid
Role: Mineral source; Properties: Defined component, Inorganic compound, Solution
4 K2HPO4
HO4P.2K 174.174 g/mol
0.5 G_PER_L CHEBI:131527
dipotassium hydrogen phosphate
Role: Buffer; Properties: Defined component, Simple component, Inorganic compound
5 KCl
Cl.K 74.551 g/mol
0.5 G_PER_L CHEBI:32588
potassium chloride
Role: Mineral source; Properties: Defined component, Inorganic compound, Simple component
6 (NH4)2SO4
2H4N.O4S 132.141 g/mol
4.5 G_PER_L CHEBI:62946
ammonium sulfate
Role: Nitrogen source; Properties: Inorganic compound, Simple component, Defined component
7 Na2SO4
2Na.O4S 142.043 g/mol
1.5 G_PER_L CHEBI:32149
sodium sulfate
Role: Mineral source; Properties: Simple component, Inorganic compound, Defined component
8 Ca(NO3)2・4H2O
Ca.4H2O.2NO3 236.146 g/mol
0.14 G_PER_L CHEBI:86159
calcium nitrate tetrahydrate
Role: Mineral source; Properties: Defined component, Inorganic compound, Simple component

Solutions

Modified UBS solution (see below)

Dose: 50 G_PER_L

1.0 M FeSO4 solution (pH 2.0)

Dose: 20 G_PER_L

Role: Mineral source; Properties: Defined component, Inorganic compound, Solution

Trace element solution (filter--sterilized) (see Medium [M773])

Dose: 10 G_PER_L

Cross-reference to Medium M773

Target organisms

No target organisms are recorded.

Provenance

TimestampCuratorActionNotes
2026-01-27T06:35:55.918115Z togo-import Imported from TOGO Medium Source: JCM, ID: M896
2026-01-28T19:48:23.272306Z chebi-enrichment Added CHEBI ontology terms to ingredients Enriched using MicrobeMediaParam and MediaDive chemical mappings
2026-02-03T00:00:00+00:00 schema-defaulter-v1.0 Applied schema defaults and normalizations Added default concentration for ingredient: H2SO4
2026-03-09T08:04:38.686438+00:00 solution-migrator-v1.0 Migrated solutions from ingredients to solutions array Moved 3 solution(s) from ingredients
2026-03-13T03:09:08.491038Z data-quality-cleanup-v1.0 Data quality fixes Merged 1 duplicate ingredient(s)
2026-03-13T06:20:12.926919Z culturemech-id-assigner-v1.0 Assigned CultureMech ID Assigned stable identifier: CultureMech:010313
2026-03-14T00:00:00+00:00 schema-defaulter-v1.0 Applied schema defaults and normalizations Added default solution name; Added default solution name; Added default solution name
2026-03-17T06:30:14.000000Z mediaingredientmech-enrichment-v1.0 Added MediaIngredientMech links Linked ingredients to MediaIngredientMech identifiers
2026-03-17T19:46:31.872974+00:00 normalize_media_names_to_snake_case.py NAME_NORMALIZED Normalized name from "Ferrovum Medium" to "ferrovum_medium" for consistent matching
2026-05-16T09:03:21.823167+00:00 migrate_legacy_fields.py MIGRATED_LEGACY_FIELDS curation_history.date->timestamp=2
2026-06-05T07:40:45.463176+00:00 mim-legacy-to-chebi-migration-v1.0 Refreshed legacy MediaIngredientMech links to CHEBI keying Replaced 6 legacy mediaingredientmech_term link(s) with mediaingredientmech_chebi_term (id-safe: ingredient's own CHEBI + label). MIM deprecated the MediaIngredientMech:NNNNNN id scheme.
2026-06-10T06:57:33.771125+00:00 mgso4-heptahydrate-term-fix-v1.0 Corrected MgSO4·7H2O primary term grounding to heptahydrate Re-grounded 1 heptahydrate-labelled ingredient(s) from CHEBI:32599 (generic magnesium sulfate) to CHEBI:31795 (magnesium sulfate heptahydrate). Generic/hexahydrate labels untouched.
2026-06-10T07:46:51.975322+00:00 primary-term-label-canonicalization-v1.0 Canonicalized primary term label to OBO canonical (OAK) 3 primary term(s); ingredient name resolved by OAK sqlite:obo:chebi.