(−)-chuangxinmycin
CHEBI:79391 EXACT SEEDED antibacterial
What these status tags mean
Curation status describes a workflow state. SEEDED means the record entered through the source-seeding workflow; it does not imply that no later curation occurred. PROPOSED marks an addition awaiting review; REVIEWED records curator sign-off on identity, structure, filing class and producer claims; DEPRECATED retains a superseded or out-of-scope record. These are workflow decisions, not independently verified human review. Agent-assisted contributions may appear in the record history.
Grounding describes the identifier mapping: EXACT uses an ontology identity asserted by the source; MINTED keeps a local identifier when no defensible ontology identity is available; REVIEW_NEEDED flags an exact structure whose ontology identity needs adjudication. The grounding note retains any unresolved alternatives. These tags do not establish the strength of producer or activity evidence.
A thiinoindole that is 3,5-dihydro-2H-thiino[4,3,2-cd]indole which is substituted at positions 2 and 3 by carboxy and methyl groups, respectively (the 2R,3S diastereoisomer).
Structure
| Standard InChIKey | DKHFLDXCKWDVMF-UPONEAKYSA-N |
|---|---|
| SMILES | C[C@@H]1[C@@H](SC2=CC=CC3=C2C1=CN3)C(=O)O |
| Stereochemistry | fully defined |
Filing pathway
Alkaloids — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is other, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Actinoplanes tsinanensis NCBITaxon:2039464 |
SOURCE_ASSERTION | mibig:BGC0001485 | url:https://pubmed.ncbi.nlm.nih.gov/327539/ |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Actinoplanes tsinanensis NCBITaxon:2039464 |
CHEBI | PMID:327539 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0001485 | Actinoplanes tsinanensis NCBITaxon:2039464 |
CLUSTER_UNSTATED | genbank:MG824991.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Mechanism & Biosynthesis Overview
Elsewhere in the fleet
- AntibioticMech — CHEBI:79391 (same structure, same inchikey)
Explore across X-Mech
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0001485 | MIBIG | 4 |
| CHEBI:79391 | CHEBI | 3-star |
This page is generated from data/natural_products/alkaloids/chuangxinmycin.yaml, which is generated from the committed inventories. Neither is edited by hand.