parabactin
naturalproductmech:mibig-736432dd5f MINTED SEEDED
Structure
| Standard InChIKey | FRCJDPPXHQGEKS-BCHFMIIMSA-N |
|---|---|
| SMILES | C[C@H]1OC(C2=CC=CC=C2O)=N[C@@H]1C(=O)N(CCCCNC(=O)C1=C(O)C(O)=CC=C1)CCCNC(=O)C1=C(O)C(O)=CC=C1 |
| Stereochemistry | fully defined |
| Cross-references | npatlas:NPA032762 |
Filing pathway
Alkaloids — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Paracoccus denitrificans PD1222 NCBITaxon:318586 |
SOURCE_ASSERTION | mibig:BGC0002493 | PMID:24927540 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Paracoccus denitrificans NCBITaxon:266 |
LOTUS | DOI:10.1016/S0040-4039(01)86717-4 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0002493 | Paracoccus denitrificans PD1222 NCBITaxon:318586 |
CLUSTER_UNSTATED | genbank:CP000489.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0002493 | MIBIG | 3 |
This page is generated from data/natural_products/alkaloids/parabactin.yaml, which is generated from the committed inventories. Neither is edited by hand.