pendolmycin
naturalproductmech:mibig-707112a6f4 MINTED SEEDED
Structure
| Standard InChIKey | JPJWIAYMFHOJRY-YWZLYKJASA-N |
|---|---|
| SMILES | CC(C)[C@H]1C(=O)N[C@@H](CC2=CNC3=C(C=CC(=C23)N1C)C(C)(C)C=C)CO |
| Stereochemistry | fully defined |
Filing pathway
Alkaloids — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Marinactinospora thermotolerans NCBITaxon:531310 |
BGC_CHARACTERIZED | mibig:BGC0000391 | PMID:22362652 |
Occurrences 3
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Nocardiopsis NCBITaxon:2013 |
LOTUS | DOI:10.1021/NP50060A022 |
| Nocardiopsis NCBITaxon:2013 |
LOTUS | DOI:10.1021/NP50077A040 |
| Marinactinospora thermotolerans NCBITaxon:531310 |
LOTUS | DOI:10.1021/NP200399T |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000391 | Marinactinospora thermotolerans NCBITaxon:531310 |
CLUSTER_DEMONSTRATED | genbank:JN634585.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000391 | MIBIG | 5 |
This page is generated from data/natural_products/alkaloids/pendolmycin.yaml, which is generated from the committed inventories. Neither is edited by hand.