piscibactin
naturalproductmech:mibig-81da63fd62 MINTED SEEDED
Structure
| Standard InChIKey | IHZPBBLBWDEMKS-PDEVRGGCSA-N |
|---|---|
| SMILES | C[C@@]1(CSC(=N1)C[C@@H]([C@@H]2CS[C@@H](N2)[C@H]3CSC(=N3)C4=CC=CC=C4O)O)C(=O)O |
| Stereochemistry | fully defined |
| Cross-references | npatlas:NPA006148 |
Filing pathway
Alkaloids — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, pks, from MIBiG.
Producer organisms 2
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Photobacterium damselae subsp. piscicida DI21 NCBITaxon:1200302 |
BGC_CHARACTERIZED | mibig:BGC0002533 | DOI:10.3389/fmicb.2018.01766 |
| Vibrio neptunius NCBITaxon:170651 |
BGC_CHARACTERIZED | mibig:BGC0002613 | DOI:10.1007/s00775-021-01916-1 |
Occurrences 0
None cited.
Biosynthetic gene clusters 2
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0002533 | Photobacterium damselae subsp. piscicida DI21 NCBITaxon:1200302 |
CLUSTER_DEMONSTRATED | genbank:KP100338.1 |
| mibig:BGC0002613 | Vibrio neptunius NCBITaxon:170651 |
CLUSTER_DEMONSTRATED | genbank:JAFHLB010000021.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Open questions 1
shared-structure — This structure is reported by more than one MIBiG entry: BGC0002533, BGC0002613. Confirm they describe the same compound rather than an upstream cross-reference error.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0002533 | MIBIG | 2 |
| BGC0002613 | MIBIG | 2 |
This page is generated from data/natural_products/alkaloids/piscibactin.yaml, which is generated from the committed inventories. Neither is edited by hand.