Prodigiosin R2
naturalproductmech:mibig-3db26f5a68 MINTED SEEDED
Structure
| Standard InChIKey | WFQBWWYLMSACAV-UHFFFAOYSA-N |
|---|---|
| SMILES | CC(C)C1C2CCCCCCCCC3=NC(=C2C4=C(C=C(N4)C5=CC=CN5)OC)C1=C3 |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
| Cross-references | npatlas:NPA021728 |
Filing pathway
Alkaloids — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Streptomyces griseoviridis NCBITaxon:45398 |
SOURCE_ASSERTION | mibig:BGC0000257 | DOI:10.1038/s41429-017-0011-1 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Streptomyces griseoviridis NCBITaxon:45398 |
LOTUS | DOI:10.1038/S41429-017-0011-1 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000257 | Streptomyces griseoviridis NCBITaxon:45398 |
CLUSTER_UNSTATED | genbank:AB469822.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000257 | MIBIG | 5 |
This page is generated from data/natural_products/alkaloids/prodigiosin-r2.yaml, which is generated from the committed inventories. Neither is edited by hand.