pyridomycin
naturalproductmech:mibig-3b8fbb619f MINTED SEEDED
Structure
| Standard InChIKey | WHIKSLGSXKIHCA-QJJXMMRLSA-N |
|---|---|
| SMILES | CC/C(=C\1/C(=O)O[C@@H]([C@@H](C(=O)N[C@H]([C@@H]([C@H](C(=O)O1)C)O)CC2=CN=CC=C2)NC(=O)C3=C(C=CC=N3)O)C)/C |
| Stereochemistry | fully defined |
| Cross-references | pubchem:3034101 |
Filing pathway
Alkaloids — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Streptomyces pyridomyceticus NCBITaxon:68260 |
SOURCE_ASSERTION | mibig:BGC0001039 | PMID:21454714 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Streptomyces torulosus NCBITaxon:68276 |
LOTUS | DOI:10.7164/ANTIBIOTICS.42.1526 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0001039 | Streptomyces pyridomyceticus NCBITaxon:68260 |
CLUSTER_UNSTATED | genbank:HM436809.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0001039 | MIBIG | 5 |
This page is generated from data/natural_products/alkaloids/pyridomycin.yaml, which is generated from the committed inventories. Neither is edited by hand.