safracin A
naturalproductmech:mibig-8828c74fc7 MINTED SEEDED
Structure
| Standard InChIKey | AZDDAJXLYMVMAW-BVFBRMCBSA-N |
|---|---|
| SMILES | CC1=C(C(=C2[C@H]3[C@@H]4CC5=C([C@@H](N4C[C@H](N3C)CC2=C1)CNC(=O)[C@H](C)N)C(=O)C(=C(C5=O)C)OC)O)OC |
| Stereochemistry | fully defined |
| Cross-references | pubchem:160293 |
Filing pathway
Alkaloids — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Pseudomonas fluorescens NCBITaxon:294 |
SOURCE_ASSERTION | mibig:BGC0000421 | PMID:15773985 |
Occurrences 4
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Pseudomonas fluorescens NCBITaxon:294 |
LOTUS | DOI:10.1111/J.1365-2958.2004.04433.X |
| Pseudomonas fluorescens NCBITaxon:294 |
LOTUS | DOI:10.7164/ANTIBIOTICS.36.1279 |
| Pseudomonas fluorescens NCBITaxon:294 |
LOTUS | DOI:10.7164/ANTIBIOTICS.36.1284 |
| Pseudomonas fluorescens NCBITaxon:294 |
LOTUS | DOI:10.7164/ANTIBIOTICS.38.767 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000421 | Pseudomonas fluorescens NCBITaxon:294 |
CLUSTER_UNSTATED | genbank:AY061859.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000421 | MIBIG | 5 |
This page is generated from data/natural_products/alkaloids/safracin-a.yaml, which is generated from the committed inventories. Neither is edited by hand.