safracin B
naturalproductmech:mibig-592432a7ee MINTED SEEDED
Structure
| Standard InChIKey | GKUZBRIJGIGFKC-ZWWMATSUSA-N |
|---|---|
| SMILES | CC1=C(OC)C(O)=C2[C@H]3[C@@H]4CC5=C(C(C(OC)=C(C)C5=O)=O)[C@H](CNC([C@@H](N)C)=O)N4C(O)[C@@H](CC2=C1)N3C |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
Filing pathway
Alkaloids — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Pseudomonas fluorescens NCBITaxon:294 |
SOURCE_ASSERTION | mibig:BGC0000421 | PMID:15773985 |
Occurrences 0
None cited.
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000421 | Pseudomonas fluorescens NCBITaxon:294 |
CLUSTER_UNSTATED | genbank:AY061859.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000421 | MIBIG | 5 |
This page is generated from data/natural_products/alkaloids/safracin-b.yaml, which is generated from the committed inventories. Neither is edited by hand.