synechobactin B
naturalproductmech:mibig-9bf3a9e95b MINTED SEEDED
Structure
| Standard InChIKey | DCRDXSPHBGCFJE-UHFFFAOYSA-N |
|---|---|
| SMILES | CCCCCCCCCC(=O)N(O)CCCNC(=O)CC(O)(CC(=O)NCCCN(O)C(C)=O)C(=O)O |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
| Cross-references | npatlas:NPA027593 |
Filing pathway
Alkaloids — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is other, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Synechococcus sp. PCC 7002 NCBITaxon:32049 |
SOURCE_ASSERTION | mibig:BGC0002470 | PMID:25786191 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Synechococcus NCBITaxon:1129 |
LOTUS | DOI:10.4319/LO.2005.50.6.1918 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0002470 | Synechococcus sp. PCC 7002 NCBITaxon:32049 |
CLUSTER_UNSTATED | genbank:CP000957.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0002470 | MIBIG | 2 |
This page is generated from data/natural_products/alkaloids/synechobactin-b.yaml, which is generated from the committed inventories. Neither is edited by hand.