vibriobactin
naturalproductmech:mibig-e84a232e42 MINTED SEEDED
Structure
| Standard InChIKey | SNUNDXZQRUCXRW-KDUQSJINSA-N |
|---|---|
| SMILES | C[C@@H]1[C@H](N/C(=C/2\C=CC=C(C2=O)O)/O1)C(=O)N(CCCNC(=O)C3C(O/C(=C\4/C=CC=C(C4=O)O)/N3)C)CCCNC(=O)C5=C(C(=CC=C5)O)O |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
| Cross-references | pubchem:5487798 |
Filing pathway
Alkaloids — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is other, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Vibrio cholerae O1 biovar El Tor str. N16961 NCBITaxon:243277 |
SOURCE_ASSERTION | mibig:BGC0000945 | PMID:9371453 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Vibrio cholerae NCBITaxon:666 |
LOTUS | DOI:10.1128/JB.179.22.7055-7062.1997 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000945 | Vibrio cholerae O1 biovar El Tor str. N16961 NCBITaxon:243277 |
CLUSTER_UNSTATED | genbank:AE003852.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000945 | MIBIG | 3 |
This page is generated from data/natural_products/alkaloids/vibriobactin-2.yaml, which is generated from the committed inventories. Neither is edited by hand.