yatakemycin
naturalproductmech:mibig-a2b558b44b MINTED SEEDED
Structure
| Standard InChIKey | CJTUMLYXLYEBOO-UHFFFAOYSA-N |
|---|---|
| SMILES | COC1=CC2=C(NC(=C2)C(=O)N2CC3CC33C4=C(NC(=C4)C(=O)N4CCC5=C6C=C(NC6=C(OC)C(O)=C45)SC(C)=O)C(=O)C=C23)C=C1O |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
| Cross-references | npatlas:NPA01250, pubchem:11721692 |
Filing pathway
Alkaloids — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Streptomyces sp. TP-A2060 NCBITaxon:991125 |
SOURCE_ASSERTION | mibig:BGC0000466 | PMID:22612591 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Streptomyces NCBITaxon:1883 |
LOTUS | DOI:10.7164/ANTIBIOTICS.56.107 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000466 | Streptomyces sp. TP-A2060 NCBITaxon:991125 |
CLUSTER_UNSTATED | genbank:JF429418.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000466 | MIBIG | 5 |
This page is generated from data/natural_products/alkaloids/yatakemycin.yaml, which is generated from the committed inventories. Neither is edited by hand.