ambactin
naturalproductmech:mibig-e3cc0a0181 MINTED SEEDED
Structure
| Standard InChIKey | HMXRHVCZYGEXRQ-JYMVZIKVSA-N |
|---|---|
| SMILES | CC(C)C[C@@H]1NC(=O)[C@@H](CC2=CC=CC=C2)NC(=O)[C@H](CCC(N)=O)NC(=O)[C@@H](CO)NC(=O)[C@H](CCCCN)NC(=O)[C@@H](CC2=CC=CC=C2)NC1=O |
| Stereochemistry | fully defined |
| Cross-references | npatlas:NPA01035 |
Filing pathway
Amino acids and peptides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Xenorhabdus miraniensis NCBITaxon:351674 |
SOURCE_ASSERTION | mibig:BGC0001131 | PMID:24816640 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Xenorhabdus NCBITaxon:626 |
LOTUS | DOI:10.1002/CBIC.201402065 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0001131 | Xenorhabdus miraniensis NCBITaxon:351674 |
CLUSTER_DEMONSTRATED | genbank:NITZ01000005.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0001131 | MIBIG | 5 |
This page is generated from data/natural_products/amino_acids_and_peptides/ambactin.yaml, which is generated from the committed inventories. Neither is edited by hand.