avaroferrin
naturalproductmech:mibig-00e11b712c MINTED SEEDED
Structure
| Standard InChIKey | XOHMZXNFDYUBOA-UHFFFAOYSA-N |
|---|---|
| SMILES | C1CCNC(=O)CCC(=O)N(CCCCNC(=O)CCC(=O)N(CC1)O)O |
| Stereochemistry | fully defined |
| Cross-references | pubchem:102234583 |
Filing pathway
Amino acids and peptides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is other, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Xenorhabdus budapestensis NCBITaxon:290110 |
BGC_CHARACTERIZED | mibig:BGC0001870 | PMID:28654175 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Shewanella algae NCBITaxon:38313 |
LOTUS | DOI:10.1002/ANIE.201310729 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0001870 | Xenorhabdus budapestensis NCBITaxon:290110 |
CLUSTER_DEMONSTRATED | genbank:NIBS01000001.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0001870 | MIBIG | 3 |
This page is generated from data/natural_products/amino_acids_and_peptides/avaroferrin.yaml, which is generated from the committed inventories. Neither is edited by hand.