berninamycin B
naturalproductmech:mibig-69d23b03fd MINTED SEEDED
Structure
| Standard InChIKey | VFTYJPKNFPTPRA-KFSKHFNISA-N |
|---|---|
| SMILES | C/C=C\1/C2=NC(=C(O2)C)C(=O)NC(=C)C(=O)N[C@H](C(=O)NC(=C)C3=NC(=C(O3)C)C(=O)NC(=C)C(=O)NC(=C)C4=NC(=CO4)C5=C(C=CC(=N5)C(=O)NC(=C)C(=O)NC(=C)C(=O)N)C6=NC(=CS6)C(=O)N[C@H](C(=O)N1)[C@@H](C)O)C(C)C |
| Stereochemistry | fully defined |
| Cross-references | npatlas:NPA017719 |
Filing pathway
Amino acids and peptides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is ribosomal, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Streptomyces sp. NCBITaxon:1931 |
BGC_CORRELATED | mibig:BGC0002363 | PMID:34617948 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Streptomyces bernensis NCBITaxon:1337893 |
LOTUS | DOI:10.7164/ANTIBIOTICS.47.1466 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0002363 | Streptomyces sp. NCBITaxon:1931 |
CLUSTER_DEMONSTRATED | genbank:MT362006.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0002363 | MIBIG | 3 |
This page is generated from data/natural_products/amino_acids_and_peptides/berninamycin-b.yaml, which is generated from the committed inventories. Neither is edited by hand.