cephamycin C
naturalproductmech:mibig-6977d4d792 MINTED SEEDED
Structure
| Standard InChIKey | LXWBXEWUSAABOA-YQIDSGEHSA-N |
|---|---|
| SMILES | CO[C@]1(NC(=O)CCCC(N)C(O)=O)C2SCC(COC(N)=O)=C(N2C1=O)C(O)=O |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
| Cross-references | npatlas:NPA08205 |
Filing pathway
Amino acids and peptides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Streptomyces clavuligerus ATCC 27064 NCBITaxon:1901 |
BGC_CHARACTERIZED | mibig:BGC0000319 | PMID:3130293 |
Occurrences 2
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Actinomyces NCBITaxon:1654 |
LOTUS | DOI:10.1128/AAC.2.3.122 |
| Streptomyces clavuligerus NCBITaxon:1901 |
LOTUS | DOI:10.1016/0378-1119(88)90557-4 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000319 | Streptomyces clavuligerus ATCC 27064 NCBITaxon:1901 |
CLUSTER_DEMONSTRATED | genbank:DS570624.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000319 | MIBIG | 5 |
This page is generated from data/natural_products/amino_acids_and_peptides/cephamycin-c.yaml, which is generated from the committed inventories. Neither is edited by hand.