citrocin
naturalproductmech:mibig-8b07d4e5d9 MINTED SEEDED
Structure
| Standard InChIKey | CNUGGUJSKKNENX-NCROSIFOSA-N |
|---|---|
| SMILES | CCC(C)[C@@H]1NC(=O)C([C@H](C)CC)NC(=O)C(CCCCCN)NC(=O)CNC(=O)[C@H](C(C)C)NC(=O)CNC(=O)CNC(=O)CC[C@@H](C(=O)N[C@@H](CC2=CC=C(O)C=C2)C(=O)N[C@@H](CC2=CC=CC=C2)C(=O)N[C@H](C(=O)NCC(=O)NCC(=O)NCC(=O)N[C@H](C(=O)NCC(=O)N[C@@H](CCNC(=N)N)C(=O)N[C@@H](CC2=CC=C(O)C=C2)C(=O)NCC(=O)O)C(C)C)[C@H](C)CC)NC1=O |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
| Cross-references | npatlas:NPA033464 |
Filing pathway
Amino acids and peptides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is ribosomal, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Citrobacter pasteurii NCBITaxon:1563222 |
SOURCE_ASSERTION | mibig:BGC0002322 | DOI:10.1074/jbc.ra118.006494 |
Occurrences 2
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Citrobacter youngae NCBITaxon:133448 |
LOTUS | DOI:10.1074/JBC.RA118.006494 |
| Citrobacter pasteurii NCBITaxon:1563222 |
LOTUS | DOI:10.1074/JBC.RA118.006494 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0002322 | Citrobacter pasteurii NCBITaxon:1563222 |
CLUSTER_DEMONSTRATED | genbank:CDHL01000044.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0002322 | MIBIG | 3 |
This page is generated from data/natural_products/amino_acids_and_peptides/citrocin.yaml, which is generated from the committed inventories. Neither is edited by hand.