glidobactin C
naturalproductmech:mibig-35224555cf MINTED SEEDED
Structure
| Standard InChIKey | UHXDSKADPILIPT-OHIHYABUSA-N |
|---|---|
| SMILES | CCCCCCCCC/C=C/C=C/C(=O)N[C@@H]([C@@H](C)O)C(=O)N[C@H]1C[C@H](CCNC(=O)/C=C\[C@@H](NC1=O)C)O |
| Stereochemistry | fully defined |
Filing pathway
Amino acids and peptides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, pks, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| [Polyangium] brachysporum NCBITaxon:413882 |
SOURCE_ASSERTION | mibig:BGC0000997 | PMID:17564599 |
Occurrences 4
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Polyangium NCBITaxon:55 |
LOTUS | DOI:10.7164/ANTIBIOTICS.41.1331 |
| Polyangium NCBITaxon:55 |
LOTUS | DOI:10.7164/ANTIBIOTICS.41.1338 |
| Polyangium NCBITaxon:55 |
LOTUS | DOI:10.7164/ANTIBIOTICS.41.1358 |
| Polyangium NCBITaxon:55 |
LOTUS | DOI:10.7164/ANTIBIOTICS.41.1906 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000997 | [Polyangium] brachysporum NCBITaxon:413882 |
CLUSTER_UNSTATED | genbank:AM412319.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000997 | MIBIG | 4 |
This page is generated from data/natural_products/amino_acids_and_peptides/glidobactin-c.yaml, which is generated from the committed inventories. Neither is edited by hand.