gramicidin
naturalproductmech:mibig-eea3f40592 MINTED SEEDED antibacterial
Structure
| Standard InChIKey | ZWCXYZRRTRDGQE-SORVKSEFSA-N |
|---|---|
| SMILES | C[C@@H](C(=O)N[C@H](CC(C)C)C(=O)N[C@@H](C)C(=O)N[C@H](C(C)C)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CC1=CNC2=CC=CC=C21)C(=O)N[C@H](CC(C)C)C(=O)N[C@@H](CC3=CNC4=CC=CC=C43)C(=O)N[C@H](CC(C)C)C(=O)N[C@@H](CC5=CNC6=CC=CC=C65)C(=O)N[C@H](CC(C)C)C(=O)N[C@@H](CC7=CNC8=CC=CC=C87)C(=O)NCCO)NC(=O)CNC(=O)[C@H](C(C)C)NC=O |
| Stereochemistry | fully defined |
| Cross-references | pubchem:16130140 |
Filing pathway
Amino acids and peptides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Brevibacillus brevis NBRC 100599 NCBITaxon:358681 |
SOURCE_ASSERTION | mibig:BGC0000367 | PMID:23144389 |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Brevibacillus brevis NCBITaxon:1393 |
LOTUS | DOI:10.1128/JB.01312-12 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000367 | Brevibacillus brevis NBRC 100599 NCBITaxon:358681 |
CLUSTER_UNSTATED | genbank:AP008955.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Elsewhere in the fleet
- AntibioticMech — antibioticmech:aro-1204fa50d9 (same structure, same inchikey)
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000367 | MIBIG | 5 |
This page is generated from data/natural_products/amino_acids_and_peptides/gramicidin.yaml, which is generated from the committed inventories. Neither is edited by hand.