patellin 6
naturalproductmech:mibig-74688f0742 MINTED SEEDED
What these status tags mean
Curation status describes a workflow state. SEEDED means the record entered through the source-seeding workflow; it does not imply that no later curation occurred. PROPOSED marks an addition awaiting review; REVIEWED records curator sign-off on identity, structure, filing class and producer claims; DEPRECATED retains a superseded or out-of-scope record. These are workflow decisions, not independently verified human review. Agent-assisted contributions may appear in the record history.
Grounding describes the identifier mapping: EXACT uses an ontology identity asserted by the source; MINTED keeps a local identifier when no defensible ontology identity is available; REVIEW_NEEDED flags an exact structure whose ontology identity needs adjudication. The grounding note retains any unresolved alternatives. These tags do not establish the strength of producer or activity evidence.
Structure
| Standard InChIKey | YDNNIZIPQWRRKH-OUJDMZAPSA-N |
|---|---|
| SMILES | C[C@H]([C@H]1C(=O)N[C@H](C2=N[C@@H](CS2)C(=O)N[C@H](C(=O)N[C@H](C(=O)N3CCC[C@H]3C(=O)N[C@H](C(=O)N4CCC[C@H]4C(=O)N1)C(C)C)CC5=CC=CC=C5)[C@@H](C)OC(C)(C)C=C)C(C)C)OC(C)(C)C=C |
| Stereochemistry | fully defined |
| Cross-references | pubchem:10350938 |
Filing pathway
Amino acids and peptides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is ribosomal, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| uncultured Prochloron sp. NCBITaxon:259942 |
SOURCE_ASSERTION | mibig:BGC0000478 | PMID:18425112 |
Occurrences 4
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Prochloron NCBITaxon:1214 |
LOTUS | DOI:10.1038/NCHEMBIO.84 |
| Prochloron NCBITaxon:1214 |
LOTUS | DOI:10.1071/CH9960659 |
| Prochloron sp. NCBITaxon:1215 |
CYANOMETDB | DOI:10.1071/CH9960659 |
| Lissoclinum NCBITaxon:13109 |
LOTUS | DOI:10.1071/CH9960659 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000478 | uncultured Prochloron sp. NCBITaxon:259942 |
CLUSTER_DEMONSTRATED | genbank:EU290743.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Mechanism & Biosynthesis Overview
Explore across X-Mech
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000478 | MIBIG | 4 |
This page is generated from data/natural_products/amino_acids_and_peptides/patellin-6.yaml, which is generated from the committed inventories. Neither is edited by hand.