pneumocandin B0
naturalproductmech:mibig-7cabcb4611 MINTED SEEDED
Structure
| Standard InChIKey | DQXPFAADCTZLNL-HDLADETGSA-N |
|---|---|
| SMILES | [H][C@@]12C[C@@H](O)CN1C(=O)[C@@]([H])(NC(=O)[C@@H](C[C@@H](O)[C@@H](O)NC(=O)[C@]1([H])[C@@H](O)CCN1C(=O)[C@@]([H])(NC(=O)[C@@]([H])(NC2=O)[C@H](O)[C@@H](O)C1=CC=C(O)C=C1)[C@H](O)CC(N)=O)NC(=O)CCCCCCCC[C@@H](C)C[C@@H](C)CC)[C@@H](C)O |
| Stereochemistry | fully defined |
| Cross-references | npatlas:NPA013799, pubchem:5742645 |
Filing pathway
Amino acids and peptides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is pks, nrps, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Glarea lozoyensis ATCC 20868 NCBITaxon:1116229 |
BGC_CHARACTERIZED | mibig:BGC0001035 | PMID:23688303 |
Occurrences 2
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Glarea lozoyensis NCBITaxon:101852 |
LOTUS | DOI:10.1186/1471-2164-14-339 |
| Glarea lozoyensis NCBITaxon:101852 |
LOTUS | DOI:10.7164/ANTIBIOTICS.45.1853 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0001035 | Glarea lozoyensis ATCC 20868 NCBITaxon:1116229 |
CLUSTER_DEMONSTRATED | genbank:KE145356.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0001035 | MIBIG | 5 |
This page is generated from data/natural_products/amino_acids_and_peptides/pneumocandin-b0.yaml, which is generated from the committed inventories. Neither is edited by hand.