prenylagaramide C
naturalproductmech:mibig-3199bfde50 MINTED SEEDED
What these status tags mean
Curation status describes a workflow state. SEEDED means the record entered through the source-seeding workflow; it does not imply that no later curation occurred. PROPOSED marks an addition awaiting review; REVIEWED records curator sign-off on identity, structure, filing class and producer claims; DEPRECATED retains a superseded or out-of-scope record. These are workflow decisions, not independently verified human review. Agent-assisted contributions may appear in the record history.
Grounding describes the identifier mapping: EXACT uses an ontology identity asserted by the source; MINTED keeps a local identifier when no defensible ontology identity is available; REVIEW_NEEDED flags an exact structure whose ontology identity needs adjudication. The grounding note retains any unresolved alternatives. These tags do not establish the strength of producer or activity evidence.
Structure
| Standard InChIKey | SIPYAYHFDUJHRA-FBUBZPHJSA-N |
|---|---|
| SMILES | O=C([C@H]([C@H](CC)C)NC(CNC([C@@H](NC([C@H](CC1=CC=C(OC/C=C(C)/C)C=C1)NC([C@H](C)NC([C@@H](NC([C@@H]2CCCN23)=O)CCC(N)=O)=O)=O)=O)CC(C)C)=O)=O)N4[C@H](C(N[C@@H](CC(C)C)C3=O)=O)CCC4 |
| Stereochemistry | fully defined |
Filing pathway
Amino acids and peptides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is ribosomal, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Planktothrix agardhii NIES-596 NCBITaxon:443922 |
SOURCE_ASSERTION | mibig:BGC0000479 | PMID:21513887 |
Occurrences 2
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Planktothrix agardhii NCBITaxon:1160 |
LOTUS | DOI:10.1016/J.CHEMBIOL.2011.01.019 |
| Planktothrix agardhii NCBITaxon:1160 |
CYANOMETDB | DOI:10.1016/j.chembiol.2011.01.019 |
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000479 | Planktothrix agardhii NIES-596 NCBITaxon:443922 |
CLUSTER_UNSTATED | genbank:HQ655154.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Mechanism & Biosynthesis Overview
Explore across X-Mech
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000479 | MIBIG | 3 |
This page is generated from data/natural_products/amino_acids_and_peptides/prenylagaramide-c.yaml, which is generated from the committed inventories. Neither is edited by hand.