serobactin B
naturalproductmech:mibig-bb2af4314c MINTED SEEDED
Structure
| Standard InChIKey | LQPRYCPJOYXBHP-UHFFFAOYSA-N |
|---|---|
| SMILES | CCCCCCCCCCCC(NC(C(O)C(O)=O)C(NC(CO)C(NC(C(O)C(O)=O)C(NC(C(C)O)C(NC(CO)C(NC1CCCN(O)C1=O)=O)=O)=O)=O)=O)=O |
| Stereochemistry | undefined stereocentres — the InChIKey does not distinguish this compound from its stereoisomers |
Filing pathway
Amino acids and peptides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is nrps, from MIBiG.
Producer organisms 1
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| Herbaspirillum seropedicae SmR1 NCBITaxon:757424 |
BGC_CHARACTERIZED | mibig:BGC0000424 | PMID:23320867 |
Occurrences 0
None cited.
Biosynthetic gene clusters 1
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000424 | Herbaspirillum seropedicae SmR1 NCBITaxon:757424 |
CLUSTER_DEMONSTRATED | genbank:CP002039.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000424 | MIBIG | 5 |
This page is generated from data/natural_products/amino_acids_and_peptides/serobactin-b.yaml, which is generated from the committed inventories. Neither is edited by hand.