trunkamide
naturalproductmech:mibig-39d1c4dde2 MINTED SEEDED
Structure
| Standard InChIKey | UTERRJKSLJLXTA-LVPVHDLMSA-N |
|---|---|
| SMILES | CC[C@H](C)[C@H]1C(=O)N[C@H](C(=O)N2CCC[C@H]2C(=O)N[C@H](C3=N[C@@H](CS3)C(=O)N[C@H](C(=O)N[C@H](C(=O)N1)COC(C)(C)C=C)[C@@H](C)OC(C)(C)C=C)CC4=CC=CC=C4)C |
| Stereochemistry | fully defined |
| Cross-references | pubchem:9811230 |
Filing pathway
Amino acids and peptides — computed by NPClassifier npclassifier.gnps2.org@2026-09-07, which is why it is pinned rather than recomputed. The gene cluster's asserted class is ribosomal, from MIBiG.
Producer organisms 2
A claim that this taxon makes the compound. The basis says what the evidence addressed — a knockout and a database assertion are not the same claim.
| Taxon | Basis | Cluster | Evidence |
|---|---|---|---|
| uncultured Prochloron sp. NCBITaxon:259942 |
SOURCE_ASSERTION | mibig:BGC0000478 | PMID:18425112 |
| uncultured Prochloron sp. NCBITaxon:259942 |
SOURCE_ASSERTION | mibig:BGC0000482 | DOI:10.1021/jo026464s |
Occurrences 1
Somebody found the compound in this organism and cited it. That is not a claim that the organism makes it, and nothing here promotes one to the other.
| Taxon | Source | Reference |
|---|---|---|
| Lissoclinum NCBITaxon:13109 |
LOTUS | DOI:10.1071/CH9960659 |
Biosynthetic gene clusters 2
| Accession | Host | Locus evidence | Genome |
|---|---|---|---|
| mibig:BGC0000478 | uncultured Prochloron sp. NCBITaxon:259942 |
CLUSTER_DEMONSTRATED | genbank:EU290743.1 |
| mibig:BGC0000482 | uncultured Prochloron sp. NCBITaxon:259942 |
CLUSTER_UNSTATED | genbank:EU290744.1 |
A locus claim and a taxon claim are different questions. Heterologous expression settles the first and leaves the second where the isolation report left it.
Open questions 1
shared-structure — This structure is reported by more than one MIBiG entry: BGC0000478, BGC0000482. Confirm they describe the same compound rather than an upstream cross-reference error.
Provenance
| Source concept | Source | Version |
|---|---|---|
| BGC0000478 | MIBIG | 4 |
| BGC0000482 | MIBIG | 4 |
This page is generated from data/natural_products/amino_acids_and_peptides/trunkamide.yaml, which is generated from the committed inventories. Neither is edited by hand.